Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm11236J3QMS7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm11236J3QMS7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gm11236J3QMS7 Gm7889-201ENSMUST00000185591 958 ntBASIC18.95■□□□□ 0.62
Gm11236J3QMS7 Gm10517-202ENSMUST00000192970 758 ntBASIC18.95■□□□□ 0.62
Gm11236J3QMS7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gm11236J3QMS7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm11236J3QMS7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm11236J3QMS7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm11236J3QMS7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm11236J3QMS7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Gm11236J3QMS7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gm11236J3QMS7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gm11236J3QMS7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gm11236J3QMS7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gm11236J3QMS7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.94■□□□□ 0.62
Gm11236J3QMS7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gm11236J3QMS7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Gm11236J3QMS7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm11236J3QMS7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gm11236J3QMS7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm11236J3QMS7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm11236J3QMS7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm11236J3QMS7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Gm11236J3QMS7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm11236J3QMS7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm11236J3QMS7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm11236J3QMS7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm11236J3QMS7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm11236J3QMS7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm11236J3QMS7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
Gm11236J3QMS7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.93■□□□□ 0.62
Gm11236J3QMS7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Gm11236J3QMS7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.93■□□□□ 0.62
Gm11236J3QMS7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.93■□□□□ 0.62
Gm11236J3QMS7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm11236J3QMS7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm11236J3QMS7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm11236J3QMS7 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.93■□□□□ 0.62
Gm11236J3QMS7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm11236J3QMS7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm11236J3QMS7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm11236J3QMS7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm11236J3QMS7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm11236J3QMS7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.92■□□□□ 0.62
Gm11236J3QMS7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Gm11236J3QMS7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Gm11236J3QMS7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm11236J3QMS7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Gm11236J3QMS7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm11236J3QMS7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm11236J3QMS7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm11236J3QMS7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm11236J3QMS7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm11236J3QMS7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm11236J3QMS7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.91■□□□□ 0.62
Gm11236J3QMS7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm11236J3QMS7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm11236J3QMS7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm11236J3QMS7 Gm27463-201ENSMUST00000183569 57 ntBASIC18.91■□□□□ 0.62
Gm11236J3QMS7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm11236J3QMS7 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.91■□□□□ 0.62
Gm11236J3QMS7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm11236J3QMS7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm11236J3QMS7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Gm11236J3QMS7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Gm11236J3QMS7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm11236J3QMS7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm11236J3QMS7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Gm11236J3QMS7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Gm11236J3QMS7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Gm11236J3QMS7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.9■□□□□ 0.62
Gm11236J3QMS7 Gm38027-201ENSMUST00000192315 235 ntBASIC18.9■□□□□ 0.62
Gm11236J3QMS7 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.9■□□□□ 0.62
Gm11236J3QMS7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.9■□□□□ 0.62
Gm11236J3QMS7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.9■□□□□ 0.62
Gm11236J3QMS7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm11236J3QMS7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm11236J3QMS7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm11236J3QMS7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Gm11236J3QMS7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Gm11236J3QMS7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Gm11236J3QMS7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm11236J3QMS7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Gm11236J3QMS7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm11236J3QMS7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm11236J3QMS7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm11236J3QMS7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm11236J3QMS7 Gm12085-201ENSMUST00000119263 940 ntBASIC18.89■□□□□ 0.61
Gm11236J3QMS7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.89■□□□□ 0.61
Gm11236J3QMS7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm11236J3QMS7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.89■□□□□ 0.61
Gm11236J3QMS7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm11236J3QMS7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm11236J3QMS7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Gm11236J3QMS7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Gm11236J3QMS7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm11236J3QMS7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm11236J3QMS7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm11236J3QMS7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms