Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb1S4R1E0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb1S4R1E0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb1S4R1E0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb1S4R1E0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
H2afb1S4R1E0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb1S4R1E0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb1S4R1E0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb1S4R1E0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb1S4R1E0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb1S4R1E0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.43■□□□□ 0.22
H2afb1S4R1E0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb1S4R1E0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb1S4R1E0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb1S4R1E0 Gm9988-201ENSMUST00000069786 435 ntBASIC16.43■□□□□ 0.22
H2afb1S4R1E0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.43■□□□□ 0.22
H2afb1S4R1E0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
H2afb1S4R1E0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb1S4R1E0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb1S4R1E0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb1S4R1E0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb1S4R1E0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb1S4R1E0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb1S4R1E0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.42■□□□□ 0.22
H2afb1S4R1E0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb1S4R1E0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb1S4R1E0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb1S4R1E0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb1S4R1E0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb1S4R1E0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.4■□□□□ 0.22
H2afb1S4R1E0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
H2afb1S4R1E0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.4■□□□□ 0.22
H2afb1S4R1E0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb1S4R1E0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb1S4R1E0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
H2afb1S4R1E0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb1S4R1E0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.4■□□□□ 0.22
H2afb1S4R1E0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
H2afb1S4R1E0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
H2afb1S4R1E0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.4■□□□□ 0.22
H2afb1S4R1E0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
H2afb1S4R1E0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb1S4R1E0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
H2afb1S4R1E0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb1S4R1E0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb1S4R1E0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb1S4R1E0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb1S4R1E0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb1S4R1E0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb1S4R1E0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb1S4R1E0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb1S4R1E0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb1S4R1E0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms