Protein–RNA interactions for Protein: Q9D6J4

Necab3, N-terminal EF-hand calcium-binding protein 3, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Necab3Q9D6J4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Necab3Q9D6J4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Necab3Q9D6J4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Necab3Q9D6J4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Necab3Q9D6J4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Necab3Q9D6J4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Necab3Q9D6J4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Necab3Q9D6J4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Necab3Q9D6J4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Necab3Q9D6J4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Necab3Q9D6J4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.39■□□□□ 0.53
Necab3Q9D6J4 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.39■□□□□ 0.53
Necab3Q9D6J4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Necab3Q9D6J4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.39■□□□□ 0.53
Necab3Q9D6J4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Necab3Q9D6J4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.39■□□□□ 0.53
Necab3Q9D6J4 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.39■□□□□ 0.53
Necab3Q9D6J4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Necab3Q9D6J4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Necab3Q9D6J4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.38■□□□□ 0.53
Necab3Q9D6J4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.38■□□□□ 0.53
Necab3Q9D6J4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Necab3Q9D6J4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Necab3Q9D6J4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Necab3Q9D6J4 Gm6433-201ENSMUST00000118634 875 ntBASIC18.38■□□□□ 0.53
Necab3Q9D6J4 Gm43799-201ENSMUST00000201845 579 ntBASIC18.38■□□□□ 0.53
Necab3Q9D6J4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Necab3Q9D6J4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Necab3Q9D6J4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Necab3Q9D6J4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Necab3Q9D6J4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Necab3Q9D6J4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Necab3Q9D6J4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
Necab3Q9D6J4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Necab3Q9D6J4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Necab3Q9D6J4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Necab3Q9D6J4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Necab3Q9D6J4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.37■□□□□ 0.53
Necab3Q9D6J4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.37■□□□□ 0.53
Necab3Q9D6J4 Gm30025-201ENSMUST00000218555 728 ntBASIC18.37■□□□□ 0.53
Necab3Q9D6J4 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.37■□□□□ 0.53
Necab3Q9D6J4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Necab3Q9D6J4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Necab3Q9D6J4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Necab3Q9D6J4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Necab3Q9D6J4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Necab3Q9D6J4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Necab3Q9D6J4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Necab3Q9D6J4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Necab3Q9D6J4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Necab3Q9D6J4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Necab3Q9D6J4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Necab3Q9D6J4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Necab3Q9D6J4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Necab3Q9D6J4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Necab3Q9D6J4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Necab3Q9D6J4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Necab3Q9D6J4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Necab3Q9D6J4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Necab3Q9D6J4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Necab3Q9D6J4 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.35■□□□□ 0.53
Necab3Q9D6J4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Necab3Q9D6J4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Necab3Q9D6J4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Necab3Q9D6J4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Necab3Q9D6J4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Necab3Q9D6J4 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.35■□□□□ 0.53
Necab3Q9D6J4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.35■□□□□ 0.53
Necab3Q9D6J4 Timm23-208ENSMUST00000226683 750 ntBASIC18.35■□□□□ 0.53
Necab3Q9D6J4 Odf3b-204ENSMUST00000227834 930 ntBASIC18.35■□□□□ 0.53
Necab3Q9D6J4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Necab3Q9D6J4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Necab3Q9D6J4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Necab3Q9D6J4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Necab3Q9D6J4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Necab3Q9D6J4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Necab3Q9D6J4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Necab3Q9D6J4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Necab3Q9D6J4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Necab3Q9D6J4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Necab3Q9D6J4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Necab3Q9D6J4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.34■□□□□ 0.53
Necab3Q9D6J4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.34■□□□□ 0.53
Necab3Q9D6J4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Necab3Q9D6J4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Necab3Q9D6J4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Necab3Q9D6J4 BC021767-201ENSMUST00000126387 1716 ntBASIC18.34■□□□□ 0.53
Necab3Q9D6J4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Necab3Q9D6J4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Necab3Q9D6J4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Necab3Q9D6J4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.34■□□□□ 0.53
Necab3Q9D6J4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Necab3Q9D6J4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Necab3Q9D6J4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Necab3Q9D6J4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.33■□□□□ 0.53
Necab3Q9D6J4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Necab3Q9D6J4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Necab3Q9D6J4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.33■□□□□ 0.53
Necab3Q9D6J4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Necab3Q9D6J4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms