Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.91■□□□□ 0.46
Lrif1Q8CDD9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
Lrif1Q8CDD9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lrif1Q8CDD9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lrif1Q8CDD9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lrif1Q8CDD9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lrif1Q8CDD9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lrif1Q8CDD9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lrif1Q8CDD9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lrif1Q8CDD9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lrif1Q8CDD9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lrif1Q8CDD9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lrif1Q8CDD9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lrif1Q8CDD9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lrif1Q8CDD9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lrif1Q8CDD9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lrif1Q8CDD9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lrif1Q8CDD9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lrif1Q8CDD9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lrif1Q8CDD9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.9■□□□□ 0.46
Lrif1Q8CDD9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lrif1Q8CDD9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lrif1Q8CDD9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lrif1Q8CDD9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lrif1Q8CDD9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Lrif1Q8CDD9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lrif1Q8CDD9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lrif1Q8CDD9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lrif1Q8CDD9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Lrif1Q8CDD9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lrif1Q8CDD9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.89■□□□□ 0.45
Lrif1Q8CDD9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Lrif1Q8CDD9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Lrif1Q8CDD9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lrif1Q8CDD9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lrif1Q8CDD9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Lrif1Q8CDD9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lrif1Q8CDD9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.89■□□□□ 0.45
Lrif1Q8CDD9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.89■□□□□ 0.45
Lrif1Q8CDD9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lrif1Q8CDD9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lrif1Q8CDD9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lrif1Q8CDD9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lrif1Q8CDD9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lrif1Q8CDD9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Lrif1Q8CDD9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lrif1Q8CDD9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lrif1Q8CDD9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lrif1Q8CDD9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lrif1Q8CDD9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Lrif1Q8CDD9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lrif1Q8CDD9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lrif1Q8CDD9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
Lrif1Q8CDD9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Lrif1Q8CDD9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lrif1Q8CDD9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lrif1Q8CDD9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lrif1Q8CDD9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lrif1Q8CDD9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lrif1Q8CDD9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lrif1Q8CDD9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lrif1Q8CDD9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Lrif1Q8CDD9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Lrif1Q8CDD9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lrif1Q8CDD9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.87■□□□□ 0.45
Lrif1Q8CDD9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.87■□□□□ 0.45
Lrif1Q8CDD9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Lrif1Q8CDD9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lrif1Q8CDD9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Lrif1Q8CDD9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lrif1Q8CDD9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lrif1Q8CDD9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lrif1Q8CDD9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lrif1Q8CDD9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.86■□□□□ 0.45
Lrif1Q8CDD9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lrif1Q8CDD9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lrif1Q8CDD9 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.86■□□□□ 0.45
Lrif1Q8CDD9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lrif1Q8CDD9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lrif1Q8CDD9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Lrif1Q8CDD9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lrif1Q8CDD9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lrif1Q8CDD9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lrif1Q8CDD9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lrif1Q8CDD9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lrif1Q8CDD9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lrif1Q8CDD9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lrif1Q8CDD9 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.85■□□□□ 0.45
Lrif1Q8CDD9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Lrif1Q8CDD9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrif1Q8CDD9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.85■□□□□ 0.45
Lrif1Q8CDD9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.85■□□□□ 0.45
Lrif1Q8CDD9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.85■□□□□ 0.45
Lrif1Q8CDD9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.85■□□□□ 0.45
Lrif1Q8CDD9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lrif1Q8CDD9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.85■□□□□ 0.45
Lrif1Q8CDD9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrif1Q8CDD9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lrif1Q8CDD9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.85■□□□□ 0.45
Lrif1Q8CDD9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms