Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Mre11Q61216 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.72■■□□□ 1.07
Mre11Q61216 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mre11Q61216 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Mre11Q61216 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mre11Q61216 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mre11Q61216 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mre11Q61216 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mre11Q61216 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mre11Q61216 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Mre11Q61216 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mre11Q61216 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mre11Q61216 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mre11Q61216 Gm7860-201ENSMUST00000121190 879 ntBASIC21.71■■□□□ 1.07
Mre11Q61216 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mre11Q61216 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mre11Q61216 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mre11Q61216 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mre11Q61216 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Mre11Q61216 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Mre11Q61216 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Mre11Q61216 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Mre11Q61216 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.7■■□□□ 1.06
Mre11Q61216 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.7■■□□□ 1.06
Mre11Q61216 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Mre11Q61216 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Mre11Q61216 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
Mre11Q61216 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Mre11Q61216 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Mre11Q61216 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Mre11Q61216 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mre11Q61216 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Mre11Q61216 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Mre11Q61216 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Mre11Q61216 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Mre11Q61216 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.69■■□□□ 1.06
Mre11Q61216 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mre11Q61216 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mre11Q61216 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Mre11Q61216 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mre11Q61216 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mre11Q61216 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mre11Q61216 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC21.69■■□□□ 1.06
Mre11Q61216 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.69■■□□□ 1.06
Mre11Q61216 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mre11Q61216 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Mre11Q61216 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC21.69■■□□□ 1.06
Mre11Q61216 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Mre11Q61216 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Mre11Q61216 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.68■■□□□ 1.06
Mre11Q61216 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mre11Q61216 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mre11Q61216 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Mre11Q61216 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Mre11Q61216 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mre11Q61216 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mre11Q61216 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mre11Q61216 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mre11Q61216 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Mre11Q61216 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mre11Q61216 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mre11Q61216 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mre11Q61216 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mre11Q61216 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mre11Q61216 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Mre11Q61216 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mre11Q61216 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC21.67■■□□□ 1.06
Mre11Q61216 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.67■■□□□ 1.06
Mre11Q61216 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Mre11Q61216 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Mre11Q61216 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Mre11Q61216 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Mre11Q61216 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
Mre11Q61216 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Mre11Q61216 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Mre11Q61216 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Mre11Q61216 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC21.66■■□□□ 1.06
Mre11Q61216 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mre11Q61216 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mre11Q61216 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Mre11Q61216 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mre11Q61216 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mre11Q61216 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Mre11Q61216 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mre11Q61216 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mre11Q61216 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mre11Q61216 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Mre11Q61216 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Mre11Q61216 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Mre11Q61216 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mre11Q61216 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Mre11Q61216 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Mre11Q61216 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.65■■□□□ 1.06
Mre11Q61216 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.65■■□□□ 1.06
Mre11Q61216 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
Mre11Q61216 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21.65■■□□□ 1.06
Mre11Q61216 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Mre11Q61216 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mre11Q61216 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Mre11Q61216 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 1946.2 ms