Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.04■□□□□ 0.64
Znf235Q61116 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.04■□□□□ 0.64
Znf235Q61116 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.04■□□□□ 0.64
Znf235Q61116 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Znf235Q61116 Iqck-206ENSMUST00000208658 2891 ntBASIC19.04■□□□□ 0.64
Znf235Q61116 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Znf235Q61116 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Znf235Q61116 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Znf235Q61116 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Znf235Q61116 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Znf235Q61116 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Znf235Q61116 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Znf235Q61116 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Znf235Q61116 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Znf235Q61116 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Znf235Q61116 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Znf235Q61116 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Znf235Q61116 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Znf235Q61116 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Znf235Q61116 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Znf235Q61116 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Znf235Q61116 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Znf235Q61116 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Znf235Q61116 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Znf235Q61116 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Znf235Q61116 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Znf235Q61116 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Znf235Q61116 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Znf235Q61116 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Znf235Q61116 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Znf235Q61116 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Znf235Q61116 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.02■□□□□ 0.64
Znf235Q61116 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Znf235Q61116 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Znf235Q61116 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Znf235Q61116 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.02■□□□□ 0.64
Znf235Q61116 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Znf235Q61116 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Znf235Q61116 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Znf235Q61116 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Znf235Q61116 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Znf235Q61116 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Znf235Q61116 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Znf235Q61116 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Znf235Q61116 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Znf235Q61116 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Znf235Q61116 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Znf235Q61116 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Znf235Q61116 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Znf235Q61116 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Znf235Q61116 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.01■□□□□ 0.63
Znf235Q61116 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Znf235Q61116 Gm7712-202ENSMUST00000222331 1510 ntBASIC19■□□□□ 0.63
Znf235Q61116 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Znf235Q61116 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Znf235Q61116 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19■□□□□ 0.63
Znf235Q61116 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Znf235Q61116 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Znf235Q61116 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19■□□□□ 0.63
Znf235Q61116 Mir7071-201ENSMUST00000184847 69 ntBASIC19■□□□□ 0.63
Znf235Q61116 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Znf235Q61116 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Znf235Q61116 Gm10616-201ENSMUST00000205285 2127 ntBASIC19■□□□□ 0.63
Znf235Q61116 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19■□□□□ 0.63
Znf235Q61116 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Znf235Q61116 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Znf235Q61116 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Znf235Q61116 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Znf235Q61116 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Znf235Q61116 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Znf235Q61116 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Znf235Q61116 Gm12382-201ENSMUST00000122005 922 ntBASIC18.99■□□□□ 0.63
Znf235Q61116 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.99■□□□□ 0.63
Znf235Q61116 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.99■□□□□ 0.63
Znf235Q61116 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Znf235Q61116 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Znf235Q61116 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.99■□□□□ 0.63
Znf235Q61116 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Znf235Q61116 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Znf235Q61116 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Znf235Q61116 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Znf235Q61116 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Znf235Q61116 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Znf235Q61116 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.98■□□□□ 0.63
Znf235Q61116 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Znf235Q61116 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Znf235Q61116 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Znf235Q61116 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.98■□□□□ 0.63
Znf235Q61116 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Znf235Q61116 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.98■□□□□ 0.63
Znf235Q61116 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.98■□□□□ 0.63
Znf235Q61116 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Znf235Q61116 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Znf235Q61116 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
Znf235Q61116 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Znf235Q61116 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.98■□□□□ 0.63
Znf235Q61116 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Znf235Q61116 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Znf235Q61116 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Znf235Q61116 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms