Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Brf2Q3UAW9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Brf2Q3UAW9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Brf2Q3UAW9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Brf2Q3UAW9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Brf2Q3UAW9 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.08■□□□□ 0.33
Brf2Q3UAW9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Brf2Q3UAW9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Brf2Q3UAW9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Brf2Q3UAW9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.08■□□□□ 0.32
Brf2Q3UAW9 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.08■□□□□ 0.32
Brf2Q3UAW9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Brf2Q3UAW9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Brf2Q3UAW9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Brf2Q3UAW9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Brf2Q3UAW9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.08■□□□□ 0.32
Brf2Q3UAW9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.08■□□□□ 0.32
Brf2Q3UAW9 Gm22325-201ENSMUST00000158904 308 ntBASIC17.08■□□□□ 0.32
Brf2Q3UAW9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Brf2Q3UAW9 Gm8495-201ENSMUST00000188740 694 ntBASIC17.08■□□□□ 0.32
Brf2Q3UAW9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Brf2Q3UAW9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Brf2Q3UAW9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Brf2Q3UAW9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.07■□□□□ 0.32
Brf2Q3UAW9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.07■□□□□ 0.32
Brf2Q3UAW9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Brf2Q3UAW9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Brf2Q3UAW9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Brf2Q3UAW9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Brf2Q3UAW9 Gm10849-201ENSMUST00000100397 618 ntBASIC17.07■□□□□ 0.32
Brf2Q3UAW9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.07■□□□□ 0.32
Brf2Q3UAW9 Gm26571-201ENSMUST00000181399 666 ntBASIC17.07■□□□□ 0.32
Brf2Q3UAW9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Brf2Q3UAW9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Brf2Q3UAW9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Brf2Q3UAW9 Grk6-206ENSMUST00000224995 2971 ntBASIC17.07■□□□□ 0.32
Brf2Q3UAW9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Brf2Q3UAW9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Brf2Q3UAW9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brf2Q3UAW9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brf2Q3UAW9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Brf2Q3UAW9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brf2Q3UAW9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Brf2Q3UAW9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.06■□□□□ 0.32
Brf2Q3UAW9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.06■□□□□ 0.32
Brf2Q3UAW9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brf2Q3UAW9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Brf2Q3UAW9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brf2Q3UAW9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Brf2Q3UAW9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brf2Q3UAW9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brf2Q3UAW9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Brf2Q3UAW9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brf2Q3UAW9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brf2Q3UAW9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brf2Q3UAW9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brf2Q3UAW9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brf2Q3UAW9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.05■□□□□ 0.32
Brf2Q3UAW9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.05■□□□□ 0.32
Brf2Q3UAW9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Brf2Q3UAW9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brf2Q3UAW9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brf2Q3UAW9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Brf2Q3UAW9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.05■□□□□ 0.32
Brf2Q3UAW9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brf2Q3UAW9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brf2Q3UAW9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brf2Q3UAW9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brf2Q3UAW9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.05■□□□□ 0.32
Brf2Q3UAW9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.05■□□□□ 0.32
Brf2Q3UAW9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.05■□□□□ 0.32
Brf2Q3UAW9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brf2Q3UAW9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Brf2Q3UAW9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brf2Q3UAW9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.04■□□□□ 0.32
Brf2Q3UAW9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brf2Q3UAW9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brf2Q3UAW9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Brf2Q3UAW9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brf2Q3UAW9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.04■□□□□ 0.32
Brf2Q3UAW9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brf2Q3UAW9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brf2Q3UAW9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Brf2Q3UAW9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brf2Q3UAW9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brf2Q3UAW9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.04■□□□□ 0.32
Brf2Q3UAW9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brf2Q3UAW9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Brf2Q3UAW9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.04■□□□□ 0.32
Brf2Q3UAW9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brf2Q3UAW9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brf2Q3UAW9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brf2Q3UAW9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Brf2Q3UAW9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brf2Q3UAW9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brf2Q3UAW9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brf2Q3UAW9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brf2Q3UAW9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brf2Q3UAW9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brf2Q3UAW9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms