Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Thumpd3P97770 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Thumpd3P97770 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Thumpd3P97770 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Thumpd3P97770 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Thumpd3P97770 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Thumpd3P97770 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Thumpd3P97770 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Thumpd3P97770 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Thumpd3P97770 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Thumpd3P97770 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Thumpd3P97770 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Thumpd3P97770 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Thumpd3P97770 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Thumpd3P97770 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.43■□□□□ 0.54
Thumpd3P97770 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.43■□□□□ 0.54
Thumpd3P97770 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.43■□□□□ 0.54
Thumpd3P97770 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Thumpd3P97770 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.43■□□□□ 0.54
Thumpd3P97770 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Thumpd3P97770 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Thumpd3P97770 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.43■□□□□ 0.54
Thumpd3P97770 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Thumpd3P97770 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Thumpd3P97770 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Thumpd3P97770 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Thumpd3P97770 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Thumpd3P97770 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Thumpd3P97770 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Thumpd3P97770 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.42■□□□□ 0.54
Thumpd3P97770 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Thumpd3P97770 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Thumpd3P97770 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Thumpd3P97770 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Thumpd3P97770 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Thumpd3P97770 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Thumpd3P97770 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.42■□□□□ 0.54
Thumpd3P97770 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Thumpd3P97770 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Thumpd3P97770 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Thumpd3P97770 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Thumpd3P97770 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Thumpd3P97770 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Thumpd3P97770 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Thumpd3P97770 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Thumpd3P97770 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Thumpd3P97770 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Thumpd3P97770 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Thumpd3P97770 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Thumpd3P97770 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.41■□□□□ 0.54
Thumpd3P97770 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Thumpd3P97770 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.41■□□□□ 0.54
Thumpd3P97770 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.41■□□□□ 0.54
Thumpd3P97770 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.41■□□□□ 0.54
Thumpd3P97770 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Thumpd3P97770 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Thumpd3P97770 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Thumpd3P97770 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Thumpd3P97770 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Thumpd3P97770 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Thumpd3P97770 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.41■□□□□ 0.54
Thumpd3P97770 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Thumpd3P97770 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Thumpd3P97770 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Thumpd3P97770 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Thumpd3P97770 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Thumpd3P97770 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Thumpd3P97770 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Thumpd3P97770 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Thumpd3P97770 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Thumpd3P97770 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.4■□□□□ 0.54
Thumpd3P97770 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Thumpd3P97770 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Thumpd3P97770 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Thumpd3P97770 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Thumpd3P97770 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Thumpd3P97770 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Thumpd3P97770 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Thumpd3P97770 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Thumpd3P97770 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Thumpd3P97770 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Thumpd3P97770 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Thumpd3P97770 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.39■□□□□ 0.53
Thumpd3P97770 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Thumpd3P97770 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Thumpd3P97770 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Thumpd3P97770 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Thumpd3P97770 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Thumpd3P97770 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.39■□□□□ 0.53
Thumpd3P97770 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.39■□□□□ 0.53
Thumpd3P97770 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Thumpd3P97770 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Thumpd3P97770 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Thumpd3P97770 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Thumpd3P97770 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Thumpd3P97770 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.38■□□□□ 0.53
Thumpd3P97770 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Thumpd3P97770 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Thumpd3P97770 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Thumpd3P97770 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms