Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TfamP40630 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TfamP40630 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.6■□□□□ 0.41
TfamP40630 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.6■□□□□ 0.41
TfamP40630 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.6■□□□□ 0.41
TfamP40630 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TfamP40630 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TfamP40630 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.6■□□□□ 0.41
TfamP40630 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TfamP40630 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TfamP40630 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TfamP40630 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.59■□□□□ 0.41
TfamP40630 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TfamP40630 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TfamP40630 Gm42778-201ENSMUST00000199644 553 ntBASIC17.59■□□□□ 0.41
TfamP40630 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TfamP40630 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TfamP40630 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TfamP40630 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TfamP40630 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TfamP40630 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TfamP40630 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.58■□□□□ 0.4
TfamP40630 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TfamP40630 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.58■□□□□ 0.4
TfamP40630 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TfamP40630 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.58■□□□□ 0.4
TfamP40630 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TfamP40630 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TfamP40630 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TfamP40630 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TfamP40630 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TfamP40630 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TfamP40630 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TfamP40630 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TfamP40630 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.57■□□□□ 0.4
TfamP40630 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TfamP40630 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TfamP40630 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
TfamP40630 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TfamP40630 Gm10493-201ENSMUST00000097270 612 ntBASIC17.57■□□□□ 0.4
TfamP40630 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TfamP40630 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TfamP40630 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TfamP40630 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TfamP40630 Fst-202ENSMUST00000223640 2612 ntBASIC17.56■□□□□ 0.4
TfamP40630 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TfamP40630 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TfamP40630 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TfamP40630 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TfamP40630 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TfamP40630 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TfamP40630 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TfamP40630 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
TfamP40630 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TfamP40630 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.55■□□□□ 0.4
TfamP40630 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TfamP40630 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TfamP40630 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.55■□□□□ 0.4
TfamP40630 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.55■□□□□ 0.4
TfamP40630 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.55■□□□□ 0.4
TfamP40630 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TfamP40630 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TfamP40630 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.55■□□□□ 0.4
TfamP40630 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TfamP40630 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
TfamP40630 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TfamP40630 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.55■□□□□ 0.4
TfamP40630 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TfamP40630 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TfamP40630 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TfamP40630 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TfamP40630 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TfamP40630 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TfamP40630 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TfamP40630 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TfamP40630 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.54■□□□□ 0.4
TfamP40630 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.54■□□□□ 0.4
TfamP40630 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TfamP40630 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TfamP40630 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TfamP40630 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TfamP40630 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.54■□□□□ 0.4
TfamP40630 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TfamP40630 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.54■□□□□ 0.4
TfamP40630 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TfamP40630 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TfamP40630 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TfamP40630 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TfamP40630 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TfamP40630 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.53■□□□□ 0.4
TfamP40630 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TfamP40630 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TfamP40630 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TfamP40630 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TfamP40630 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TfamP40630 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.53■□□□□ 0.4
TfamP40630 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.53■□□□□ 0.4
TfamP40630 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TfamP40630 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TfamP40630 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms