Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hdac1O09106 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hdac1O09106 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Hdac1O09106 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hdac1O09106 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.61■■□□□ 1.05
Hdac1O09106 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Hdac1O09106 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.61■■□□□ 1.05
Hdac1O09106 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.61■■□□□ 1.05
Hdac1O09106 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Hdac1O09106 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Hdac1O09106 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hdac1O09106 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Hdac1O09106 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hdac1O09106 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hdac1O09106 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Hdac1O09106 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hdac1O09106 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hdac1O09106 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hdac1O09106 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hdac1O09106 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hdac1O09106 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Hdac1O09106 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hdac1O09106 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hdac1O09106 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hdac1O09106 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Hdac1O09106 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hdac1O09106 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Hdac1O09106 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hdac1O09106 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.6■■□□□ 1.05
Hdac1O09106 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hdac1O09106 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hdac1O09106 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hdac1O09106 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hdac1O09106 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hdac1O09106 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hdac1O09106 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Hdac1O09106 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.59■■□□□ 1.05
Hdac1O09106 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hdac1O09106 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Hdac1O09106 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Hdac1O09106 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hdac1O09106 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hdac1O09106 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hdac1O09106 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hdac1O09106 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hdac1O09106 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hdac1O09106 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hdac1O09106 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hdac1O09106 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.58■■□□□ 1.05
Hdac1O09106 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.58■■□□□ 1.05
Hdac1O09106 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.58■■□□□ 1.05
Hdac1O09106 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hdac1O09106 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hdac1O09106 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hdac1O09106 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
Hdac1O09106 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.58■■□□□ 1.04
Hdac1O09106 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Hdac1O09106 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hdac1O09106 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hdac1O09106 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Hdac1O09106 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC21.57■■□□□ 1.04
Hdac1O09106 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.57■■□□□ 1.04
Hdac1O09106 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hdac1O09106 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.57■■□□□ 1.04
Hdac1O09106 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hdac1O09106 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC21.57■■□□□ 1.04
Hdac1O09106 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hdac1O09106 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hdac1O09106 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hdac1O09106 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.57■■□□□ 1.04
Hdac1O09106 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hdac1O09106 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Hdac1O09106 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hdac1O09106 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hdac1O09106 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.57■■□□□ 1.04
Hdac1O09106 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hdac1O09106 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hdac1O09106 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Hdac1O09106 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hdac1O09106 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.56■■□□□ 1.04
Hdac1O09106 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hdac1O09106 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hdac1O09106 Gm43294-201ENSMUST00000202850 2490 ntBASIC21.56■■□□□ 1.04
Hdac1O09106 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Hdac1O09106 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hdac1O09106 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hdac1O09106 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Hdac1O09106 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hdac1O09106 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.56■■□□□ 1.04
Hdac1O09106 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hdac1O09106 Gm13234-201ENSMUST00000120010 747 ntBASIC21.56■■□□□ 1.04
Hdac1O09106 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Hdac1O09106 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
Hdac1O09106 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hdac1O09106 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Hdac1O09106 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hdac1O09106 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hdac1O09106 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hdac1O09106 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hdac1O09106 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms