Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Thumpd3P97770 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Thumpd3P97770 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.51■□□□□ 0.55
Thumpd3P97770 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.51■□□□□ 0.55
Thumpd3P97770 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Thumpd3P97770 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Thumpd3P97770 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Thumpd3P97770 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Thumpd3P97770 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Thumpd3P97770 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Thumpd3P97770 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.5■□□□□ 0.55
Thumpd3P97770 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Thumpd3P97770 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Thumpd3P97770 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.5■□□□□ 0.55
Thumpd3P97770 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.5■□□□□ 0.55
Thumpd3P97770 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Thumpd3P97770 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.5■□□□□ 0.55
Thumpd3P97770 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Thumpd3P97770 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Thumpd3P97770 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Thumpd3P97770 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Thumpd3P97770 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Thumpd3P97770 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Thumpd3P97770 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Thumpd3P97770 Gm7860-201ENSMUST00000121190 879 ntBASIC18.49■□□□□ 0.55
Thumpd3P97770 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.49■□□□□ 0.55
Thumpd3P97770 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Thumpd3P97770 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.49■□□□□ 0.55
Thumpd3P97770 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.49■□□□□ 0.55
Thumpd3P97770 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.49■□□□□ 0.55
Thumpd3P97770 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.49■□□□□ 0.55
Thumpd3P97770 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Thumpd3P97770 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Thumpd3P97770 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Thumpd3P97770 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Thumpd3P97770 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Thumpd3P97770 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Thumpd3P97770 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Thumpd3P97770 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Thumpd3P97770 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Thumpd3P97770 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Thumpd3P97770 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Thumpd3P97770 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.49■□□□□ 0.55
Thumpd3P97770 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Thumpd3P97770 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Thumpd3P97770 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Thumpd3P97770 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Thumpd3P97770 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Thumpd3P97770 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Thumpd3P97770 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Thumpd3P97770 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Thumpd3P97770 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Thumpd3P97770 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Thumpd3P97770 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Thumpd3P97770 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.48■□□□□ 0.55
Thumpd3P97770 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Thumpd3P97770 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Thumpd3P97770 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Thumpd3P97770 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.48■□□□□ 0.55
Thumpd3P97770 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Thumpd3P97770 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Thumpd3P97770 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Thumpd3P97770 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Thumpd3P97770 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Thumpd3P97770 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Thumpd3P97770 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Thumpd3P97770 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.47■□□□□ 0.55
Thumpd3P97770 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Thumpd3P97770 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Thumpd3P97770 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Thumpd3P97770 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Thumpd3P97770 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Thumpd3P97770 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Thumpd3P97770 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Thumpd3P97770 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Thumpd3P97770 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.46■□□□□ 0.55
Thumpd3P97770 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Thumpd3P97770 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Thumpd3P97770 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Thumpd3P97770 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Thumpd3P97770 Reep4-203ENSMUST00000226563 1444 ntBASIC18.46■□□□□ 0.55
Thumpd3P97770 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Thumpd3P97770 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Thumpd3P97770 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Thumpd3P97770 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Thumpd3P97770 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Thumpd3P97770 Gm13234-201ENSMUST00000120010 747 ntBASIC18.45■□□□□ 0.54
Thumpd3P97770 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Thumpd3P97770 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Thumpd3P97770 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.45■□□□□ 0.54
Thumpd3P97770 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Thumpd3P97770 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Thumpd3P97770 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Thumpd3P97770 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Thumpd3P97770 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Thumpd3P97770 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Thumpd3P97770 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Thumpd3P97770 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Thumpd3P97770 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.44■□□□□ 0.54
Thumpd3P97770 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms