Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TfamP40630 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TfamP40630 Gm13234-201ENSMUST00000120010 747 ntBASIC17.66■□□□□ 0.42
TfamP40630 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TfamP40630 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TfamP40630 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TfamP40630 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TfamP40630 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TfamP40630 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.66■□□□□ 0.42
TfamP40630 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TfamP40630 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TfamP40630 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TfamP40630 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TfamP40630 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TfamP40630 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TfamP40630 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TfamP40630 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TfamP40630 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TfamP40630 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TfamP40630 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TfamP40630 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TfamP40630 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TfamP40630 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TfamP40630 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TfamP40630 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.65■□□□□ 0.42
TfamP40630 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TfamP40630 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TfamP40630 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.65■□□□□ 0.42
TfamP40630 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TfamP40630 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
TfamP40630 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TfamP40630 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TfamP40630 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.64■□□□□ 0.42
TfamP40630 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TfamP40630 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TfamP40630 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TfamP40630 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.64■□□□□ 0.41
TfamP40630 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TfamP40630 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TfamP40630 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TfamP40630 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TfamP40630 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TfamP40630 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.64■□□□□ 0.41
TfamP40630 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.64■□□□□ 0.41
TfamP40630 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.64■□□□□ 0.41
TfamP40630 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TfamP40630 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TfamP40630 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TfamP40630 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TfamP40630 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TfamP40630 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TfamP40630 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TfamP40630 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TfamP40630 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TfamP40630 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TfamP40630 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TfamP40630 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TfamP40630 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TfamP40630 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.63■□□□□ 0.41
TfamP40630 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
TfamP40630 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TfamP40630 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TfamP40630 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TfamP40630 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TfamP40630 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TfamP40630 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TfamP40630 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TfamP40630 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TfamP40630 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TfamP40630 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TfamP40630 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TfamP40630 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.62■□□□□ 0.41
TfamP40630 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TfamP40630 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TfamP40630 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TfamP40630 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.62■□□□□ 0.41
TfamP40630 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.62■□□□□ 0.41
TfamP40630 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.62■□□□□ 0.41
TfamP40630 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TfamP40630 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TfamP40630 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TfamP40630 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TfamP40630 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
TfamP40630 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TfamP40630 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
TfamP40630 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TfamP40630 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TfamP40630 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TfamP40630 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TfamP40630 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.61■□□□□ 0.41
TfamP40630 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TfamP40630 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TfamP40630 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TfamP40630 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TfamP40630 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.61■□□□□ 0.41
TfamP40630 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
TfamP40630 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TfamP40630 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TfamP40630 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.6■□□□□ 0.41
TfamP40630 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms