Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav10A0A075B642 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav10A0A075B642 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.15■□□□□ 0.18
Trav10A0A075B642 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav10A0A075B642 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav10A0A075B642 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav10A0A075B642 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav10A0A075B642 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav10A0A075B642 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav10A0A075B642 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav10A0A075B642 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav10A0A075B642 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav10A0A075B642 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav10A0A075B642 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav10A0A075B642 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav10A0A075B642 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav10A0A075B642 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trav10A0A075B642 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.14■□□□□ 0.17
Trav10A0A075B642 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav10A0A075B642 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav10A0A075B642 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav10A0A075B642 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.14■□□□□ 0.17
Trav10A0A075B642 Gm7291-201ENSMUST00000199147 382 ntBASIC16.14■□□□□ 0.17
Trav10A0A075B642 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav10A0A075B642 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav10A0A075B642 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav10A0A075B642 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav10A0A075B642 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav10A0A075B642 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav10A0A075B642 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav10A0A075B642 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav10A0A075B642 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav10A0A075B642 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav10A0A075B642 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav10A0A075B642 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav10A0A075B642 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav10A0A075B642 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav10A0A075B642 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav10A0A075B642 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav10A0A075B642 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.13■□□□□ 0.17
Trav10A0A075B642 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav10A0A075B642 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.13■□□□□ 0.17
Trav10A0A075B642 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav10A0A075B642 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav10A0A075B642 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav10A0A075B642 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav10A0A075B642 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav10A0A075B642 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav10A0A075B642 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav10A0A075B642 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav10A0A075B642 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav10A0A075B642 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav10A0A075B642 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav10A0A075B642 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav10A0A075B642 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav10A0A075B642 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav10A0A075B642 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav10A0A075B642 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav10A0A075B642 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.12■□□□□ 0.17
Trav10A0A075B642 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav10A0A075B642 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav10A0A075B642 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav10A0A075B642 Fst-202ENSMUST00000223640 2612 ntBASIC16.12■□□□□ 0.17
Trav10A0A075B642 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav10A0A075B642 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Trav10A0A075B642 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav10A0A075B642 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav10A0A075B642 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav10A0A075B642 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav10A0A075B642 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav10A0A075B642 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav10A0A075B642 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav10A0A075B642 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav10A0A075B642 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav10A0A075B642 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav10A0A075B642 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trav10A0A075B642 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.11■□□□□ 0.17
Trav10A0A075B642 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav10A0A075B642 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav10A0A075B642 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.11■□□□□ 0.17
Trav10A0A075B642 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav10A0A075B642 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav10A0A075B642 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav10A0A075B642 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Trav10A0A075B642 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Trav10A0A075B642 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav10A0A075B642 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav10A0A075B642 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.11■□□□□ 0.17
Trav10A0A075B642 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav10A0A075B642 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav10A0A075B642 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav10A0A075B642 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav10A0A075B642 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav10A0A075B642 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav10A0A075B642 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav10A0A075B642 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav10A0A075B642 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.1■□□□□ 0.17
Trav10A0A075B642 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.1■□□□□ 0.17
Trav10A0A075B642 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav10A0A075B642 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms