Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.56■□□□□ 0.24
H2afb1S4R1E0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
H2afb1S4R1E0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb1S4R1E0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb1S4R1E0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb1S4R1E0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb1S4R1E0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb1S4R1E0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb1S4R1E0 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.55■□□□□ 0.24
H2afb1S4R1E0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb1S4R1E0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
H2afb1S4R1E0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
H2afb1S4R1E0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb1S4R1E0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb1S4R1E0 Gm43060-201ENSMUST00000200621 289 ntBASIC16.55■□□□□ 0.24
H2afb1S4R1E0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.55■□□□□ 0.24
H2afb1S4R1E0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb1S4R1E0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb1S4R1E0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
H2afb1S4R1E0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb1S4R1E0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb1S4R1E0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb1S4R1E0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb1S4R1E0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb1S4R1E0 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.54■□□□□ 0.24
H2afb1S4R1E0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.54■□□□□ 0.24
H2afb1S4R1E0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.54■□□□□ 0.24
H2afb1S4R1E0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb1S4R1E0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb1S4R1E0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb1S4R1E0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb1S4R1E0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb1S4R1E0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.54■□□□□ 0.24
H2afb1S4R1E0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb1S4R1E0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb1S4R1E0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb1S4R1E0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb1S4R1E0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb1S4R1E0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb1S4R1E0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb1S4R1E0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb1S4R1E0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb1S4R1E0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb1S4R1E0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
H2afb1S4R1E0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb1S4R1E0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.53■□□□□ 0.24
H2afb1S4R1E0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb1S4R1E0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
H2afb1S4R1E0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb1S4R1E0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb1S4R1E0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb1S4R1E0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb1S4R1E0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb1S4R1E0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb1S4R1E0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb1S4R1E0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb1S4R1E0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb1S4R1E0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.52■□□□□ 0.24
H2afb1S4R1E0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb1S4R1E0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb1S4R1E0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.52■□□□□ 0.23
H2afb1S4R1E0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
H2afb1S4R1E0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
H2afb1S4R1E0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
H2afb1S4R1E0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
H2afb1S4R1E0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
H2afb1S4R1E0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.52■□□□□ 0.23
H2afb1S4R1E0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
H2afb1S4R1E0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.51■□□□□ 0.23
H2afb1S4R1E0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
H2afb1S4R1E0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb1S4R1E0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb1S4R1E0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb1S4R1E0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb1S4R1E0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.51■□□□□ 0.23
H2afb1S4R1E0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.51■□□□□ 0.23
H2afb1S4R1E0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb1S4R1E0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb1S4R1E0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb1S4R1E0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb1S4R1E0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb1S4R1E0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb1S4R1E0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb1S4R1E0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb1S4R1E0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb1S4R1E0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb1S4R1E0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb1S4R1E0 Fst-202ENSMUST00000223640 2612 ntBASIC16.5■□□□□ 0.23
H2afb1S4R1E0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb1S4R1E0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
H2afb1S4R1E0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb1S4R1E0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb1S4R1E0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb1S4R1E0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb1S4R1E0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb1S4R1E0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.5■□□□□ 0.23
H2afb1S4R1E0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb1S4R1E0 Gm38205-201ENSMUST00000192243 258 ntBASIC16.5■□□□□ 0.23
H2afb1S4R1E0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.5■□□□□ 0.23
H2afb1S4R1E0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms