Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf138Q9CQE0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rnf138Q9CQE0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf138Q9CQE0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf138Q9CQE0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf138Q9CQE0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.11■□□□□ 0.33
Rnf138Q9CQE0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf138Q9CQE0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf138Q9CQE0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.11■□□□□ 0.33
Rnf138Q9CQE0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf138Q9CQE0 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.1■□□□□ 0.33
Rnf138Q9CQE0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf138Q9CQE0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf138Q9CQE0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rnf138Q9CQE0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf138Q9CQE0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf138Q9CQE0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf138Q9CQE0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.1■□□□□ 0.33
Rnf138Q9CQE0 Gm37292-201ENSMUST00000192062 758 ntBASIC17.1■□□□□ 0.33
Rnf138Q9CQE0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf138Q9CQE0 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.1■□□□□ 0.33
Rnf138Q9CQE0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf138Q9CQE0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf138Q9CQE0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf138Q9CQE0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf138Q9CQE0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rnf138Q9CQE0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf138Q9CQE0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rnf138Q9CQE0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf138Q9CQE0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf138Q9CQE0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.09■□□□□ 0.33
Rnf138Q9CQE0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf138Q9CQE0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf138Q9CQE0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf138Q9CQE0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf138Q9CQE0 Gm43183-201ENSMUST00000200632 547 ntBASIC17.09■□□□□ 0.33
Rnf138Q9CQE0 Gm42545-201ENSMUST00000202755 922 ntBASIC17.09■□□□□ 0.33
Rnf138Q9CQE0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf138Q9CQE0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rnf138Q9CQE0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rnf138Q9CQE0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf138Q9CQE0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf138Q9CQE0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf138Q9CQE0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf138Q9CQE0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rnf138Q9CQE0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.08■□□□□ 0.33
Rnf138Q9CQE0 Golph3-205ENSMUST00000228671 2842 ntBASIC17.08■□□□□ 0.33
Rnf138Q9CQE0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf138Q9CQE0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf138Q9CQE0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf138Q9CQE0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf138Q9CQE0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf138Q9CQE0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf138Q9CQE0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf138Q9CQE0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.08■□□□□ 0.32
Rnf138Q9CQE0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Rnf138Q9CQE0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf138Q9CQE0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.08■□□□□ 0.32
Rnf138Q9CQE0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Rnf138Q9CQE0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Rnf138Q9CQE0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf138Q9CQE0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf138Q9CQE0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rnf138Q9CQE0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rnf138Q9CQE0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.08■□□□□ 0.32
Rnf138Q9CQE0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf138Q9CQE0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf138Q9CQE0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rnf138Q9CQE0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf138Q9CQE0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf138Q9CQE0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf138Q9CQE0 Gm715-201ENSMUST00000117865 831 ntBASIC17.07■□□□□ 0.32
Rnf138Q9CQE0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf138Q9CQE0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf138Q9CQE0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.07■□□□□ 0.32
Rnf138Q9CQE0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf138Q9CQE0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rnf138Q9CQE0 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.07■□□□□ 0.32
Rnf138Q9CQE0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf138Q9CQE0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rnf138Q9CQE0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rnf138Q9CQE0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf138Q9CQE0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf138Q9CQE0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf138Q9CQE0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf138Q9CQE0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf138Q9CQE0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.06■□□□□ 0.32
Rnf138Q9CQE0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf138Q9CQE0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.06■□□□□ 0.32
Rnf138Q9CQE0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf138Q9CQE0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf138Q9CQE0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf138Q9CQE0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.06■□□□□ 0.32
Rnf138Q9CQE0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf138Q9CQE0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.06■□□□□ 0.32
Rnf138Q9CQE0 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.06■□□□□ 0.32
Rnf138Q9CQE0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.06■□□□□ 0.32
Rnf138Q9CQE0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf138Q9CQE0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf138Q9CQE0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms