Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scube3Q66PY1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scube3Q66PY1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.17■□□□□ 0.66
Scube3Q66PY1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scube3Q66PY1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scube3Q66PY1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scube3Q66PY1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scube3Q66PY1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Scube3Q66PY1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scube3Q66PY1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scube3Q66PY1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Scube3Q66PY1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.16■□□□□ 0.66
Scube3Q66PY1 Gm12896-201ENSMUST00000118430 226 ntBASIC19.16■□□□□ 0.66
Scube3Q66PY1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.16■□□□□ 0.66
Scube3Q66PY1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Scube3Q66PY1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scube3Q66PY1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.16■□□□□ 0.66
Scube3Q66PY1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Scube3Q66PY1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.15■□□□□ 0.66
Scube3Q66PY1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scube3Q66PY1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scube3Q66PY1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scube3Q66PY1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scube3Q66PY1 Gm2559-201ENSMUST00000201323 363 ntBASIC19.15■□□□□ 0.66
Scube3Q66PY1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scube3Q66PY1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Scube3Q66PY1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.15■□□□□ 0.66
Scube3Q66PY1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scube3Q66PY1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scube3Q66PY1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scube3Q66PY1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scube3Q66PY1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scube3Q66PY1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scube3Q66PY1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scube3Q66PY1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scube3Q66PY1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.14■□□□□ 0.65
Scube3Q66PY1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scube3Q66PY1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Scube3Q66PY1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scube3Q66PY1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Scube3Q66PY1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scube3Q66PY1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scube3Q66PY1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scube3Q66PY1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scube3Q66PY1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scube3Q66PY1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scube3Q66PY1 Gm2399-201ENSMUST00000104944 225 ntBASIC19.13■□□□□ 0.65
Scube3Q66PY1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Scube3Q66PY1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.13■□□□□ 0.65
Scube3Q66PY1 Gm10653-202ENSMUST00000139570 835 ntBASIC19.13■□□□□ 0.65
Scube3Q66PY1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scube3Q66PY1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scube3Q66PY1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.13■□□□□ 0.65
Scube3Q66PY1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Scube3Q66PY1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scube3Q66PY1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.13■□□□□ 0.65
Scube3Q66PY1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.13■□□□□ 0.65
Scube3Q66PY1 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.13■□□□□ 0.65
Scube3Q66PY1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.13■□□□□ 0.65
Scube3Q66PY1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Scube3Q66PY1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scube3Q66PY1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scube3Q66PY1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Scube3Q66PY1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scube3Q66PY1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scube3Q66PY1 Dio3-201ENSMUST00000097228 1449 ntBASIC19.12■□□□□ 0.65
Scube3Q66PY1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.12■□□□□ 0.65
Scube3Q66PY1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scube3Q66PY1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scube3Q66PY1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scube3Q66PY1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scube3Q66PY1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Scube3Q66PY1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scube3Q66PY1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Scube3Q66PY1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scube3Q66PY1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.11■□□□□ 0.65
Scube3Q66PY1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scube3Q66PY1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scube3Q66PY1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Scube3Q66PY1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scube3Q66PY1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.11■□□□□ 0.65
Scube3Q66PY1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.11■□□□□ 0.65
Scube3Q66PY1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Scube3Q66PY1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Scube3Q66PY1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.11■□□□□ 0.65
Scube3Q66PY1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scube3Q66PY1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.11■□□□□ 0.65
Scube3Q66PY1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scube3Q66PY1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Scube3Q66PY1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scube3Q66PY1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Scube3Q66PY1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scube3Q66PY1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Scube3Q66PY1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scube3Q66PY1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scube3Q66PY1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scube3Q66PY1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.1■□□□□ 0.65
Scube3Q66PY1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scube3Q66PY1 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.1■□□□□ 0.65
Scube3Q66PY1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms