Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.34■□□□□ 0.53
Pfdn6Q03958 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pfdn6Q03958 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pfdn6Q03958 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.34■□□□□ 0.53
Pfdn6Q03958 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.34■□□□□ 0.53
Pfdn6Q03958 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.34■□□□□ 0.53
Pfdn6Q03958 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pfdn6Q03958 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pfdn6Q03958 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pfdn6Q03958 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pfdn6Q03958 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pfdn6Q03958 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pfdn6Q03958 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pfdn6Q03958 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pfdn6Q03958 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pfdn6Q03958 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pfdn6Q03958 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.33■□□□□ 0.53
Pfdn6Q03958 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.33■□□□□ 0.53
Pfdn6Q03958 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pfdn6Q03958 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pfdn6Q03958 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pfdn6Q03958 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pfdn6Q03958 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pfdn6Q03958 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pfdn6Q03958 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Pfdn6Q03958 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pfdn6Q03958 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pfdn6Q03958 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.33■□□□□ 0.52
Pfdn6Q03958 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pfdn6Q03958 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pfdn6Q03958 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pfdn6Q03958 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pfdn6Q03958 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pfdn6Q03958 Gm7514-201ENSMUST00000209475 934 ntBASIC18.32■□□□□ 0.52
Pfdn6Q03958 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pfdn6Q03958 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Pfdn6Q03958 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pfdn6Q03958 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pfdn6Q03958 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pfdn6Q03958 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pfdn6Q03958 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pfdn6Q03958 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pfdn6Q03958 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pfdn6Q03958 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pfdn6Q03958 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pfdn6Q03958 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pfdn6Q03958 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pfdn6Q03958 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.31■□□□□ 0.52
Pfdn6Q03958 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.31■□□□□ 0.52
Pfdn6Q03958 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.31■□□□□ 0.52
Pfdn6Q03958 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pfdn6Q03958 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pfdn6Q03958 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pfdn6Q03958 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Pfdn6Q03958 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pfdn6Q03958 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pfdn6Q03958 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pfdn6Q03958 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pfdn6Q03958 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pfdn6Q03958 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Pfdn6Q03958 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pfdn6Q03958 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
Pfdn6Q03958 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pfdn6Q03958 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.3■□□□□ 0.52
Pfdn6Q03958 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.3■□□□□ 0.52
Pfdn6Q03958 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.3■□□□□ 0.52
Pfdn6Q03958 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pfdn6Q03958 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pfdn6Q03958 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pfdn6Q03958 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pfdn6Q03958 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Pfdn6Q03958 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pfdn6Q03958 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pfdn6Q03958 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Pfdn6Q03958 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pfdn6Q03958 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pfdn6Q03958 Gm18284-201ENSMUST00000172604 624 ntBASIC18.29■□□□□ 0.52
Pfdn6Q03958 Gm10033-202ENSMUST00000211874 928 ntBASIC18.29■□□□□ 0.52
Pfdn6Q03958 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pfdn6Q03958 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.29■□□□□ 0.52
Pfdn6Q03958 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pfdn6Q03958 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pfdn6Q03958 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pfdn6Q03958 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pfdn6Q03958 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pfdn6Q03958 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.29■□□□□ 0.52
Pfdn6Q03958 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pfdn6Q03958 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pfdn6Q03958 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pfdn6Q03958 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pfdn6Q03958 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pfdn6Q03958 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.28■□□□□ 0.52
Pfdn6Q03958 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pfdn6Q03958 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pfdn6Q03958 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.28■□□□□ 0.52
Pfdn6Q03958 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pfdn6Q03958 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pfdn6Q03958 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pfdn6Q03958 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pfdn6Q03958 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms