Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Scube3Q66PY1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.24■□□□□ 0.67
Scube3Q66PY1 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.24■□□□□ 0.67
Scube3Q66PY1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Scube3Q66PY1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Scube3Q66PY1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scube3Q66PY1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scube3Q66PY1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scube3Q66PY1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Scube3Q66PY1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scube3Q66PY1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Scube3Q66PY1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scube3Q66PY1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scube3Q66PY1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scube3Q66PY1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scube3Q66PY1 Gm12527-201ENSMUST00000117967 564 ntBASIC19.22■□□□□ 0.67
Scube3Q66PY1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Scube3Q66PY1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.22■□□□□ 0.67
Scube3Q66PY1 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.22■□□□□ 0.67
Scube3Q66PY1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scube3Q66PY1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scube3Q66PY1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scube3Q66PY1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scube3Q66PY1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scube3Q66PY1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scube3Q66PY1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Scube3Q66PY1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scube3Q66PY1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scube3Q66PY1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scube3Q66PY1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Scube3Q66PY1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.21■□□□□ 0.67
Scube3Q66PY1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scube3Q66PY1 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.21■□□□□ 0.67
Scube3Q66PY1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scube3Q66PY1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scube3Q66PY1 Gm37444-201ENSMUST00000193605 439 ntBASIC19.21■□□□□ 0.67
Scube3Q66PY1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scube3Q66PY1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.21■□□□□ 0.67
Scube3Q66PY1 Gm20049-201ENSMUST00000219950 730 ntBASIC19.21■□□□□ 0.67
Scube3Q66PY1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scube3Q66PY1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scube3Q66PY1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scube3Q66PY1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.21■□□□□ 0.67
Scube3Q66PY1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scube3Q66PY1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scube3Q66PY1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scube3Q66PY1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scube3Q66PY1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Scube3Q66PY1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scube3Q66PY1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scube3Q66PY1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scube3Q66PY1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scube3Q66PY1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scube3Q66PY1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scube3Q66PY1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scube3Q66PY1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.2■□□□□ 0.66
Scube3Q66PY1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scube3Q66PY1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.2■□□□□ 0.66
Scube3Q66PY1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scube3Q66PY1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scube3Q66PY1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scube3Q66PY1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scube3Q66PY1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scube3Q66PY1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scube3Q66PY1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scube3Q66PY1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scube3Q66PY1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Scube3Q66PY1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Scube3Q66PY1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scube3Q66PY1 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.19■□□□□ 0.66
Scube3Q66PY1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scube3Q66PY1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.19■□□□□ 0.66
Scube3Q66PY1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Scube3Q66PY1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scube3Q66PY1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.19■□□□□ 0.66
Scube3Q66PY1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scube3Q66PY1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scube3Q66PY1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scube3Q66PY1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scube3Q66PY1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scube3Q66PY1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scube3Q66PY1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scube3Q66PY1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scube3Q66PY1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scube3Q66PY1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scube3Q66PY1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scube3Q66PY1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.18■□□□□ 0.66
Scube3Q66PY1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scube3Q66PY1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scube3Q66PY1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scube3Q66PY1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Scube3Q66PY1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.18■□□□□ 0.66
Scube3Q66PY1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.18■□□□□ 0.66
Scube3Q66PY1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Scube3Q66PY1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scube3Q66PY1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scube3Q66PY1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scube3Q66PY1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scube3Q66PY1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scube3Q66PY1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms