Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Brf2Q3UAW9 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.28■□□□□ 0.36
Brf2Q3UAW9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brf2Q3UAW9 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.28■□□□□ 0.36
Brf2Q3UAW9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brf2Q3UAW9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brf2Q3UAW9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Brf2Q3UAW9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brf2Q3UAW9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.28■□□□□ 0.36
Brf2Q3UAW9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.28■□□□□ 0.36
Brf2Q3UAW9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brf2Q3UAW9 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.28■□□□□ 0.36
Brf2Q3UAW9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brf2Q3UAW9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brf2Q3UAW9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brf2Q3UAW9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Brf2Q3UAW9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Brf2Q3UAW9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Brf2Q3UAW9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Brf2Q3UAW9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Brf2Q3UAW9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Brf2Q3UAW9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Brf2Q3UAW9 Gm10033-202ENSMUST00000211874 928 ntBASIC17.27■□□□□ 0.36
Brf2Q3UAW9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Brf2Q3UAW9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Brf2Q3UAW9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Brf2Q3UAW9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
Brf2Q3UAW9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Brf2Q3UAW9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Brf2Q3UAW9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brf2Q3UAW9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brf2Q3UAW9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.26■□□□□ 0.35
Brf2Q3UAW9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Brf2Q3UAW9 Gm42642-201ENSMUST00000200683 355 ntBASIC17.26■□□□□ 0.35
Brf2Q3UAW9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.26■□□□□ 0.35
Brf2Q3UAW9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.26■□□□□ 0.35
Brf2Q3UAW9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brf2Q3UAW9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brf2Q3UAW9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.26■□□□□ 0.35
Brf2Q3UAW9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brf2Q3UAW9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brf2Q3UAW9 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.25■□□□□ 0.35
Brf2Q3UAW9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brf2Q3UAW9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brf2Q3UAW9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brf2Q3UAW9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brf2Q3UAW9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brf2Q3UAW9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Brf2Q3UAW9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brf2Q3UAW9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brf2Q3UAW9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.25■□□□□ 0.35
Brf2Q3UAW9 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.25■□□□□ 0.35
Brf2Q3UAW9 Gm7514-201ENSMUST00000209475 934 ntBASIC17.25■□□□□ 0.35
Brf2Q3UAW9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Brf2Q3UAW9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.25■□□□□ 0.35
Brf2Q3UAW9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brf2Q3UAW9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Brf2Q3UAW9 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.25■□□□□ 0.35
Brf2Q3UAW9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brf2Q3UAW9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brf2Q3UAW9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brf2Q3UAW9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brf2Q3UAW9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brf2Q3UAW9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brf2Q3UAW9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Brf2Q3UAW9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
Brf2Q3UAW9 Gm6420-201ENSMUST00000193885 723 ntBASIC17.24■□□□□ 0.35
Brf2Q3UAW9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brf2Q3UAW9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Brf2Q3UAW9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.24■□□□□ 0.35
Brf2Q3UAW9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brf2Q3UAW9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brf2Q3UAW9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brf2Q3UAW9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Brf2Q3UAW9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brf2Q3UAW9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brf2Q3UAW9 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.23■□□□□ 0.35
Brf2Q3UAW9 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.23■□□□□ 0.35
Brf2Q3UAW9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Brf2Q3UAW9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brf2Q3UAW9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brf2Q3UAW9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brf2Q3UAW9 Nespas-201ENSMUST00000143738 1083 ntBASIC17.23■□□□□ 0.35
Brf2Q3UAW9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brf2Q3UAW9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Brf2Q3UAW9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Brf2Q3UAW9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Brf2Q3UAW9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brf2Q3UAW9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brf2Q3UAW9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brf2Q3UAW9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brf2Q3UAW9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Brf2Q3UAW9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.22■□□□□ 0.35
Brf2Q3UAW9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.22■□□□□ 0.35
Brf2Q3UAW9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Brf2Q3UAW9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brf2Q3UAW9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Brf2Q3UAW9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Brf2Q3UAW9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brf2Q3UAW9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms