Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim63Q38HM4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim63Q38HM4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trim63Q38HM4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim63Q38HM4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim63Q38HM4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim63Q38HM4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim63Q38HM4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim63Q38HM4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim63Q38HM4 Gm42809-201ENSMUST00000198429 1138 ntBASIC15.22■□□□□ 0.03
Trim63Q38HM4 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim63Q38HM4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim63Q38HM4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim63Q38HM4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim63Q38HM4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim63Q38HM4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim63Q38HM4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim63Q38HM4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim63Q38HM4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim63Q38HM4 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim63Q38HM4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Trim63Q38HM4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim63Q38HM4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim63Q38HM4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Trim63Q38HM4 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.21■□□□□ 0.03
Trim63Q38HM4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim63Q38HM4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim63Q38HM4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim63Q38HM4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim63Q38HM4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim63Q38HM4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim63Q38HM4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim63Q38HM4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim63Q38HM4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Trim63Q38HM4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim63Q38HM4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim63Q38HM4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim63Q38HM4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim63Q38HM4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim63Q38HM4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim63Q38HM4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim63Q38HM4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim63Q38HM4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim63Q38HM4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim63Q38HM4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trim63Q38HM4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim63Q38HM4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim63Q38HM4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim63Q38HM4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim63Q38HM4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim63Q38HM4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim63Q38HM4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim63Q38HM4 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.2■□□□□ 0.02
Trim63Q38HM4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim63Q38HM4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim63Q38HM4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim63Q38HM4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim63Q38HM4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim63Q38HM4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim63Q38HM4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim63Q38HM4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim63Q38HM4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim63Q38HM4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim63Q38HM4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim63Q38HM4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim63Q38HM4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim63Q38HM4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim63Q38HM4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim63Q38HM4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim63Q38HM4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim63Q38HM4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim63Q38HM4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim63Q38HM4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim63Q38HM4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim63Q38HM4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim63Q38HM4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim63Q38HM4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim63Q38HM4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim63Q38HM4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.18■□□□□ 0.02
Trim63Q38HM4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms