Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Thumpd3P97770 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Thumpd3P97770 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Thumpd3P97770 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Thumpd3P97770 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Thumpd3P97770 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Thumpd3P97770 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Thumpd3P97770 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Thumpd3P97770 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Thumpd3P97770 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.63■□□□□ 0.57
Thumpd3P97770 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Thumpd3P97770 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Thumpd3P97770 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Thumpd3P97770 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Thumpd3P97770 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Thumpd3P97770 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Thumpd3P97770 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Thumpd3P97770 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Thumpd3P97770 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.62■□□□□ 0.57
Thumpd3P97770 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Thumpd3P97770 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Thumpd3P97770 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.62■□□□□ 0.57
Thumpd3P97770 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Thumpd3P97770 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.62■□□□□ 0.57
Thumpd3P97770 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Thumpd3P97770 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Thumpd3P97770 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Thumpd3P97770 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Thumpd3P97770 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Thumpd3P97770 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.62■□□□□ 0.57
Thumpd3P97770 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Thumpd3P97770 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Thumpd3P97770 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Thumpd3P97770 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Thumpd3P97770 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Thumpd3P97770 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Thumpd3P97770 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Thumpd3P97770 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.61■□□□□ 0.57
Thumpd3P97770 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Thumpd3P97770 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Thumpd3P97770 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Thumpd3P97770 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Thumpd3P97770 Gm10849-201ENSMUST00000100397 618 ntBASIC18.61■□□□□ 0.57
Thumpd3P97770 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Thumpd3P97770 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.61■□□□□ 0.57
Thumpd3P97770 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Thumpd3P97770 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Thumpd3P97770 Gm9988-201ENSMUST00000069786 435 ntBASIC18.61■□□□□ 0.57
Thumpd3P97770 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Thumpd3P97770 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Thumpd3P97770 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Thumpd3P97770 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Thumpd3P97770 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Thumpd3P97770 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Thumpd3P97770 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Thumpd3P97770 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Thumpd3P97770 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Thumpd3P97770 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Thumpd3P97770 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Thumpd3P97770 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Thumpd3P97770 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Thumpd3P97770 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.59■□□□□ 0.57
Thumpd3P97770 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Thumpd3P97770 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Thumpd3P97770 AV356131-201ENSMUST00000206201 750 ntBASIC18.59■□□□□ 0.57
Thumpd3P97770 Gm10033-202ENSMUST00000211874 928 ntBASIC18.59■□□□□ 0.57
Thumpd3P97770 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Thumpd3P97770 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Thumpd3P97770 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Thumpd3P97770 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Thumpd3P97770 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Thumpd3P97770 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Thumpd3P97770 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.58■□□□□ 0.57
Thumpd3P97770 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Thumpd3P97770 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Thumpd3P97770 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Thumpd3P97770 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Thumpd3P97770 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.58■□□□□ 0.56
Thumpd3P97770 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Thumpd3P97770 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Thumpd3P97770 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Thumpd3P97770 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Thumpd3P97770 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Thumpd3P97770 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Thumpd3P97770 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.57■□□□□ 0.56
Thumpd3P97770 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.57■□□□□ 0.56
Thumpd3P97770 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms