Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BckdkO55028 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BckdkO55028 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BckdkO55028 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BckdkO55028 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
BckdkO55028 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BckdkO55028 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BckdkO55028 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BckdkO55028 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.96■□□□□ 0.31
BckdkO55028 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BckdkO55028 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
BckdkO55028 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BckdkO55028 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
BckdkO55028 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
BckdkO55028 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
BckdkO55028 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BckdkO55028 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BckdkO55028 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BckdkO55028 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BckdkO55028 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BckdkO55028 Nespas-201ENSMUST00000143738 1083 ntBASIC16.95■□□□□ 0.3
BckdkO55028 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
BckdkO55028 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BckdkO55028 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
BckdkO55028 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BckdkO55028 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BckdkO55028 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BckdkO55028 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
BckdkO55028 Grk6-206ENSMUST00000224995 2971 ntBASIC16.95■□□□□ 0.3
BckdkO55028 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BckdkO55028 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BckdkO55028 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
BckdkO55028 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.94■□□□□ 0.3
BckdkO55028 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BckdkO55028 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BckdkO55028 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
BckdkO55028 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BckdkO55028 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BckdkO55028 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BckdkO55028 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BckdkO55028 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BckdkO55028 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
BckdkO55028 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BckdkO55028 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
BckdkO55028 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.93■□□□□ 0.3
BckdkO55028 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
BckdkO55028 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BckdkO55028 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BckdkO55028 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
BckdkO55028 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BckdkO55028 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.93■□□□□ 0.3
BckdkO55028 Gm4968-201ENSMUST00000071458 858 ntBASIC16.93■□□□□ 0.3
BckdkO55028 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
BckdkO55028 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BckdkO55028 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BckdkO55028 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BckdkO55028 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.93■□□□□ 0.3
BckdkO55028 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BckdkO55028 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BckdkO55028 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BckdkO55028 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BckdkO55028 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BckdkO55028 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BckdkO55028 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BckdkO55028 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
BckdkO55028 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BckdkO55028 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BckdkO55028 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BckdkO55028 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BckdkO55028 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.92■□□□□ 0.3
BckdkO55028 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.92■□□□□ 0.3
BckdkO55028 Gm5408-201ENSMUST00000197998 747 ntBASIC16.92■□□□□ 0.3
BckdkO55028 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BckdkO55028 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
BckdkO55028 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
BckdkO55028 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BckdkO55028 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.92■□□□□ 0.3
BckdkO55028 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BckdkO55028 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BckdkO55028 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
BckdkO55028 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BckdkO55028 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
BckdkO55028 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BckdkO55028 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BckdkO55028 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BckdkO55028 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
BckdkO55028 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BckdkO55028 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BckdkO55028 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BckdkO55028 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BckdkO55028 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
BckdkO55028 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BckdkO55028 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BckdkO55028 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BckdkO55028 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
BckdkO55028 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
BckdkO55028 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
BckdkO55028 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BckdkO55028 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BckdkO55028 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms