Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb1S4R1E0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb1S4R1E0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb1S4R1E0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb1S4R1E0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.66■□□□□ 0.26
H2afb1S4R1E0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb1S4R1E0 Gm6139-201ENSMUST00000079261 882 ntBASIC16.66■□□□□ 0.26
H2afb1S4R1E0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb1S4R1E0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb1S4R1E0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
H2afb1S4R1E0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.66■□□□□ 0.26
H2afb1S4R1E0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.66■□□□□ 0.26
H2afb1S4R1E0 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.66■□□□□ 0.26
H2afb1S4R1E0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb1S4R1E0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb1S4R1E0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb1S4R1E0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.65■□□□□ 0.26
H2afb1S4R1E0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb1S4R1E0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
H2afb1S4R1E0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.65■□□□□ 0.26
H2afb1S4R1E0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
H2afb1S4R1E0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb1S4R1E0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb1S4R1E0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb1S4R1E0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb1S4R1E0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb1S4R1E0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb1S4R1E0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb1S4R1E0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb1S4R1E0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb1S4R1E0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
H2afb1S4R1E0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb1S4R1E0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
H2afb1S4R1E0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb1S4R1E0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb1S4R1E0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb1S4R1E0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb1S4R1E0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.64■□□□□ 0.25
H2afb1S4R1E0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb1S4R1E0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
H2afb1S4R1E0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb1S4R1E0 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.64■□□□□ 0.25
H2afb1S4R1E0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb1S4R1E0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb1S4R1E0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb1S4R1E0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb1S4R1E0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb1S4R1E0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb1S4R1E0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb1S4R1E0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb1S4R1E0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb1S4R1E0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.63■□□□□ 0.25
H2afb1S4R1E0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb1S4R1E0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb1S4R1E0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb1S4R1E0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb1S4R1E0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb1S4R1E0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb1S4R1E0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb1S4R1E0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb1S4R1E0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
H2afb1S4R1E0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb1S4R1E0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb1S4R1E0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.62■□□□□ 0.25
H2afb1S4R1E0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb1S4R1E0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
H2afb1S4R1E0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb1S4R1E0 Gm45417-201ENSMUST00000209533 758 ntBASIC16.62■□□□□ 0.25
H2afb1S4R1E0 Gm40848-201ENSMUST00000221998 324 ntBASIC16.62■□□□□ 0.25
H2afb1S4R1E0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb1S4R1E0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb1S4R1E0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb1S4R1E0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb1S4R1E0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb1S4R1E0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb1S4R1E0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb1S4R1E0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb1S4R1E0 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.61■□□□□ 0.25
H2afb1S4R1E0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb1S4R1E0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb1S4R1E0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb1S4R1E0 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.61■□□□□ 0.25
H2afb1S4R1E0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb1S4R1E0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb1S4R1E0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.61■□□□□ 0.25
H2afb1S4R1E0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb1S4R1E0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
H2afb1S4R1E0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb1S4R1E0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb1S4R1E0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb1S4R1E0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb1S4R1E0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb1S4R1E0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb1S4R1E0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.61■□□□□ 0.25
H2afb1S4R1E0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
H2afb1S4R1E0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.6■□□□□ 0.25
H2afb1S4R1E0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms