Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.86□□□□□ -0.03
Smco4Q9JIS3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smco4Q9JIS3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smco4Q9JIS3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Smco4Q9JIS3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC14.86□□□□□ -0.03
Smco4Q9JIS3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smco4Q9JIS3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smco4Q9JIS3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smco4Q9JIS3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.86□□□□□ -0.03
Smco4Q9JIS3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smco4Q9JIS3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smco4Q9JIS3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smco4Q9JIS3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smco4Q9JIS3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smco4Q9JIS3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Smco4Q9JIS3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smco4Q9JIS3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smco4Q9JIS3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smco4Q9JIS3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smco4Q9JIS3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.85□□□□□ -0.03
Smco4Q9JIS3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smco4Q9JIS3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smco4Q9JIS3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smco4Q9JIS3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC14.85□□□□□ -0.03
Smco4Q9JIS3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smco4Q9JIS3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smco4Q9JIS3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smco4Q9JIS3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smco4Q9JIS3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Smco4Q9JIS3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smco4Q9JIS3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Smco4Q9JIS3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smco4Q9JIS3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco4Q9JIS3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco4Q9JIS3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco4Q9JIS3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco4Q9JIS3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco4Q9JIS3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco4Q9JIS3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Smco4Q9JIS3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco4Q9JIS3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC14.84□□□□□ -0.03
Smco4Q9JIS3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco4Q9JIS3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Smco4Q9JIS3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Smco4Q9JIS3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco4Q9JIS3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Smco4Q9JIS3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco4Q9JIS3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Smco4Q9JIS3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco4Q9JIS3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Smco4Q9JIS3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Smco4Q9JIS3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Smco4Q9JIS3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smco4Q9JIS3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smco4Q9JIS3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Smco4Q9JIS3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smco4Q9JIS3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smco4Q9JIS3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smco4Q9JIS3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.83□□□□□ -0.04
Smco4Q9JIS3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smco4Q9JIS3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smco4Q9JIS3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smco4Q9JIS3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Smco4Q9JIS3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smco4Q9JIS3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smco4Q9JIS3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smco4Q9JIS3 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.82□□□□□ -0.04
Smco4Q9JIS3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Smco4Q9JIS3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smco4Q9JIS3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smco4Q9JIS3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smco4Q9JIS3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Smco4Q9JIS3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smco4Q9JIS3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smco4Q9JIS3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC14.82□□□□□ -0.04
Smco4Q9JIS3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smco4Q9JIS3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smco4Q9JIS3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smco4Q9JIS3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smco4Q9JIS3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smco4Q9JIS3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.82□□□□□ -0.04
Smco4Q9JIS3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smco4Q9JIS3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms