Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43aQ3TL54 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43aQ3TL54 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43aQ3TL54 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trim43aQ3TL54 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43aQ3TL54 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Trim43aQ3TL54 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43aQ3TL54 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43aQ3TL54 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43aQ3TL54 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43aQ3TL54 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Trim43aQ3TL54 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43aQ3TL54 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43aQ3TL54 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.48■□□□□ 0.71
Trim43aQ3TL54 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43aQ3TL54 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43aQ3TL54 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trim43aQ3TL54 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43aQ3TL54 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43aQ3TL54 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Trim43aQ3TL54 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43aQ3TL54 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trim43aQ3TL54 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.47■□□□□ 0.71
Trim43aQ3TL54 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim43aQ3TL54 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.47■□□□□ 0.71
Trim43aQ3TL54 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.47■□□□□ 0.71
Trim43aQ3TL54 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim43aQ3TL54 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim43aQ3TL54 Fst-202ENSMUST00000223640 2612 ntBASIC19.47■□□□□ 0.71
Trim43aQ3TL54 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim43aQ3TL54 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim43aQ3TL54 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43aQ3TL54 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43aQ3TL54 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim43aQ3TL54 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43aQ3TL54 Gm11421-201ENSMUST00000122124 294 ntBASIC19.46■□□□□ 0.71
Trim43aQ3TL54 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43aQ3TL54 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43aQ3TL54 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43aQ3TL54 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim43aQ3TL54 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim43aQ3TL54 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43aQ3TL54 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43aQ3TL54 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43aQ3TL54 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43aQ3TL54 Smad6-203ENSMUST00000179458 273 ntBASIC19.45■□□□□ 0.7
Trim43aQ3TL54 Gm27801-201ENSMUST00000184174 223 ntBASIC19.45■□□□□ 0.7
Trim43aQ3TL54 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trim43aQ3TL54 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43aQ3TL54 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43aQ3TL54 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim43aQ3TL54 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43aQ3TL54 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43aQ3TL54 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43aQ3TL54 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
Trim43aQ3TL54 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim43aQ3TL54 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim43aQ3TL54 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43aQ3TL54 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim43aQ3TL54 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim43aQ3TL54 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43aQ3TL54 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trim43aQ3TL54 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43aQ3TL54 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43aQ3TL54 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43aQ3TL54 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43aQ3TL54 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43aQ3TL54 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43aQ3TL54 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim43aQ3TL54 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43aQ3TL54 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43aQ3TL54 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43aQ3TL54 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43aQ3TL54 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43aQ3TL54 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43aQ3TL54 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.43■□□□□ 0.7
Trim43aQ3TL54 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43aQ3TL54 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.43■□□□□ 0.7
Trim43aQ3TL54 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.43■□□□□ 0.7
Trim43aQ3TL54 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43aQ3TL54 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.43■□□□□ 0.7
Trim43aQ3TL54 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43aQ3TL54 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Trim43aQ3TL54 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43aQ3TL54 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.42■□□□□ 0.7
Trim43aQ3TL54 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim43aQ3TL54 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim43aQ3TL54 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.42■□□□□ 0.7
Trim43aQ3TL54 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim43aQ3TL54 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim43aQ3TL54 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim43aQ3TL54 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim43aQ3TL54 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim43aQ3TL54 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim43aQ3TL54 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim43aQ3TL54 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim43aQ3TL54 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43aQ3TL54 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Trim43aQ3TL54 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43aQ3TL54 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms