Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Thumpd3P97770 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Thumpd3P97770 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thumpd3P97770 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thumpd3P97770 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.69■□□□□ 0.58
Thumpd3P97770 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thumpd3P97770 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thumpd3P97770 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Thumpd3P97770 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Thumpd3P97770 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.69■□□□□ 0.58
Thumpd3P97770 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.69■□□□□ 0.58
Thumpd3P97770 Gm18671-201ENSMUST00000214826 683 ntBASIC18.69■□□□□ 0.58
Thumpd3P97770 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thumpd3P97770 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thumpd3P97770 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thumpd3P97770 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thumpd3P97770 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Thumpd3P97770 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Thumpd3P97770 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Thumpd3P97770 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.69■□□□□ 0.58
Thumpd3P97770 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thumpd3P97770 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Thumpd3P97770 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Thumpd3P97770 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Thumpd3P97770 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Thumpd3P97770 Gm27405-201ENSMUST00000184201 112 ntBASIC18.68■□□□□ 0.58
Thumpd3P97770 Gm42778-201ENSMUST00000199644 553 ntBASIC18.68■□□□□ 0.58
Thumpd3P97770 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Thumpd3P97770 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Thumpd3P97770 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Thumpd3P97770 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Thumpd3P97770 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Thumpd3P97770 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Thumpd3P97770 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
Thumpd3P97770 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Thumpd3P97770 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Thumpd3P97770 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.68■□□□□ 0.58
Thumpd3P97770 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Thumpd3P97770 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Thumpd3P97770 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Thumpd3P97770 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.67■□□□□ 0.58
Thumpd3P97770 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Thumpd3P97770 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Thumpd3P97770 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.67■□□□□ 0.58
Thumpd3P97770 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.67■□□□□ 0.58
Thumpd3P97770 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Thumpd3P97770 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Thumpd3P97770 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.67■□□□□ 0.58
Thumpd3P97770 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Thumpd3P97770 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.67■□□□□ 0.58
Thumpd3P97770 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.67■□□□□ 0.58
Thumpd3P97770 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Thumpd3P97770 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.67■□□□□ 0.58
Thumpd3P97770 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Thumpd3P97770 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.67■□□□□ 0.58
Thumpd3P97770 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Thumpd3P97770 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Thumpd3P97770 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thumpd3P97770 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thumpd3P97770 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thumpd3P97770 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.66■□□□□ 0.58
Thumpd3P97770 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thumpd3P97770 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thumpd3P97770 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.66■□□□□ 0.58
Thumpd3P97770 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thumpd3P97770 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Thumpd3P97770 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Thumpd3P97770 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thumpd3P97770 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thumpd3P97770 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thumpd3P97770 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Thumpd3P97770 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.66■□□□□ 0.58
Thumpd3P97770 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thumpd3P97770 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.65■□□□□ 0.58
Thumpd3P97770 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Thumpd3P97770 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Thumpd3P97770 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Thumpd3P97770 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Thumpd3P97770 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Thumpd3P97770 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Thumpd3P97770 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Thumpd3P97770 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Thumpd3P97770 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Thumpd3P97770 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.65■□□□□ 0.58
Thumpd3P97770 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.65■□□□□ 0.58
Thumpd3P97770 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Thumpd3P97770 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Thumpd3P97770 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Thumpd3P97770 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Thumpd3P97770 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Thumpd3P97770 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Thumpd3P97770 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Thumpd3P97770 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Thumpd3P97770 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Thumpd3P97770 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Thumpd3P97770 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Thumpd3P97770 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.64■□□□□ 0.57
Thumpd3P97770 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Thumpd3P97770 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.64■□□□□ 0.57
Thumpd3P97770 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms