Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BckdkO55028 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BckdkO55028 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BckdkO55028 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.02■□□□□ 0.32
BckdkO55028 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
BckdkO55028 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BckdkO55028 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
BckdkO55028 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BckdkO55028 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BckdkO55028 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
BckdkO55028 Gm13534-201ENSMUST00000121169 513 ntBASIC17.02■□□□□ 0.32
BckdkO55028 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.02■□□□□ 0.32
BckdkO55028 Gm27011-201ENSMUST00000182352 972 ntBASIC17.02■□□□□ 0.32
BckdkO55028 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.02■□□□□ 0.32
BckdkO55028 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.02■□□□□ 0.32
BckdkO55028 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
BckdkO55028 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
BckdkO55028 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BckdkO55028 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BckdkO55028 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BckdkO55028 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.01■□□□□ 0.31
BckdkO55028 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BckdkO55028 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.01■□□□□ 0.31
BckdkO55028 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BckdkO55028 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.01■□□□□ 0.31
BckdkO55028 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BckdkO55028 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.01■□□□□ 0.31
BckdkO55028 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BckdkO55028 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.01■□□□□ 0.31
BckdkO55028 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
BckdkO55028 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.01■□□□□ 0.31
BckdkO55028 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
BckdkO55028 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BckdkO55028 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.01■□□□□ 0.31
BckdkO55028 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
BckdkO55028 Gm9885-202ENSMUST00000186234 2209 ntBASIC17■□□□□ 0.31
BckdkO55028 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
BckdkO55028 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BckdkO55028 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17■□□□□ 0.31
BckdkO55028 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17■□□□□ 0.31
BckdkO55028 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17■□□□□ 0.31
BckdkO55028 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
BckdkO55028 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17■□□□□ 0.31
BckdkO55028 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17■□□□□ 0.31
BckdkO55028 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17■□□□□ 0.31
BckdkO55028 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17■□□□□ 0.31
BckdkO55028 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BckdkO55028 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BckdkO55028 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17■□□□□ 0.31
BckdkO55028 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BckdkO55028 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17■□□□□ 0.31
BckdkO55028 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BckdkO55028 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
BckdkO55028 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
BckdkO55028 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BckdkO55028 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BckdkO55028 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BckdkO55028 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BckdkO55028 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BckdkO55028 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BckdkO55028 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.99■□□□□ 0.31
BckdkO55028 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
BckdkO55028 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
BckdkO55028 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.99■□□□□ 0.31
BckdkO55028 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
BckdkO55028 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
BckdkO55028 Gm7860-201ENSMUST00000121190 879 ntBASIC16.99■□□□□ 0.31
BckdkO55028 Gm12441-201ENSMUST00000121806 588 ntBASIC16.99■□□□□ 0.31
BckdkO55028 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
BckdkO55028 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.99■□□□□ 0.31
BckdkO55028 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
BckdkO55028 Rarb-207ENSMUST00000225921 2756 ntBASIC16.99■□□□□ 0.31
BckdkO55028 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
BckdkO55028 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BckdkO55028 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.98■□□□□ 0.31
BckdkO55028 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BckdkO55028 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BckdkO55028 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
BckdkO55028 Gm6420-201ENSMUST00000193885 723 ntBASIC16.98■□□□□ 0.31
BckdkO55028 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BckdkO55028 Gm6365-201ENSMUST00000054711 744 ntBASIC16.98■□□□□ 0.31
BckdkO55028 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BckdkO55028 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
BckdkO55028 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BckdkO55028 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BckdkO55028 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BckdkO55028 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BckdkO55028 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BckdkO55028 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BckdkO55028 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BckdkO55028 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BckdkO55028 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.97■□□□□ 0.31
BckdkO55028 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.97■□□□□ 0.31
BckdkO55028 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BckdkO55028 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BckdkO55028 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BckdkO55028 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
BckdkO55028 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BckdkO55028 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
BckdkO55028 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms