Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pfdn5Q9WU28 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pfdn5Q9WU28 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.95■□□□□ 0.78
Pfdn5Q9WU28 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pfdn5Q9WU28 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Pfdn5Q9WU28 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pfdn5Q9WU28 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pfdn5Q9WU28 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pfdn5Q9WU28 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Pfdn5Q9WU28 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.93■□□□□ 0.78
Pfdn5Q9WU28 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
Pfdn5Q9WU28 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Pfdn5Q9WU28 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pfdn5Q9WU28 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pfdn5Q9WU28 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pfdn5Q9WU28 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pfdn5Q9WU28 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pfdn5Q9WU28 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Pfdn5Q9WU28 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pfdn5Q9WU28 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pfdn5Q9WU28 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pfdn5Q9WU28 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
Pfdn5Q9WU28 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pfdn5Q9WU28 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pfdn5Q9WU28 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pfdn5Q9WU28 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Pfdn5Q9WU28 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pfdn5Q9WU28 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pfdn5Q9WU28 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pfdn5Q9WU28 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pfdn5Q9WU28 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pfdn5Q9WU28 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pfdn5Q9WU28 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pfdn5Q9WU28 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pfdn5Q9WU28 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pfdn5Q9WU28 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pfdn5Q9WU28 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pfdn5Q9WU28 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pfdn5Q9WU28 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pfdn5Q9WU28 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pfdn5Q9WU28 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Pfdn5Q9WU28 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.77■□□□□ 0.76
Pfdn5Q9WU28 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pfdn5Q9WU28 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pfdn5Q9WU28 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pfdn5Q9WU28 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pfdn5Q9WU28 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Pfdn5Q9WU28 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pfdn5Q9WU28 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Pfdn5Q9WU28 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pfdn5Q9WU28 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.75■□□□□ 0.75
Pfdn5Q9WU28 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pfdn5Q9WU28 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pfdn5Q9WU28 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pfdn5Q9WU28 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pfdn5Q9WU28 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pfdn5Q9WU28 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn5Q9WU28 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pfdn5Q9WU28 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pfdn5Q9WU28 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.69■□□□□ 0.74
Pfdn5Q9WU28 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Pfdn5Q9WU28 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn5Q9WU28 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn5Q9WU28 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn5Q9WU28 Gm25262-201ENSMUST00000174934 133 ntBASIC19.68■□□□□ 0.74
Pfdn5Q9WU28 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.67■□□□□ 0.74
Pfdn5Q9WU28 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn5Q9WU28 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn5Q9WU28 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn5Q9WU28 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn5Q9WU28 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn5Q9WU28 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn5Q9WU28 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn5Q9WU28 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Pfdn5Q9WU28 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pfdn5Q9WU28 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pfdn5Q9WU28 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pfdn5Q9WU28 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Pfdn5Q9WU28 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Pfdn5Q9WU28 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.64■□□□□ 0.73
Pfdn5Q9WU28 Amer2-203ENSMUST00000225247 2662 ntBASIC19.64■□□□□ 0.73
Pfdn5Q9WU28 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pfdn5Q9WU28 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.63■□□□□ 0.73
Pfdn5Q9WU28 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.62■□□□□ 0.73
Pfdn5Q9WU28 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn5Q9WU28 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn5Q9WU28 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn5Q9WU28 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.62■□□□□ 0.73
Pfdn5Q9WU28 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn5Q9WU28 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn5Q9WU28 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn5Q9WU28 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pfdn5Q9WU28 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn5Q9WU28 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn5Q9WU28 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pfdn5Q9WU28 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pfdn5Q9WU28 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pfdn5Q9WU28 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pfdn5Q9WU28 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pfdn5Q9WU28 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms