Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Mbd3l1Q9D9H3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mbd3l1Q9D9H3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mbd3l1Q9D9H3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Mbd3l1Q9D9H3 Gm23366-201ENSMUST00000175022 89 ntBASIC21.42■■□□□ 1.02
Mbd3l1Q9D9H3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Mbd3l1Q9D9H3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
Mbd3l1Q9D9H3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Mbd3l1Q9D9H3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Mbd3l1Q9D9H3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Mbd3l1Q9D9H3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Mbd3l1Q9D9H3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.4■■□□□ 1.02
Mbd3l1Q9D9H3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Mbd3l1Q9D9H3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mbd3l1Q9D9H3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mbd3l1Q9D9H3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mbd3l1Q9D9H3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mbd3l1Q9D9H3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mbd3l1Q9D9H3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mbd3l1Q9D9H3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mbd3l1Q9D9H3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mbd3l1Q9D9H3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mbd3l1Q9D9H3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Mbd3l1Q9D9H3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mbd3l1Q9D9H3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mbd3l1Q9D9H3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Mbd3l1Q9D9H3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mbd3l1Q9D9H3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Mbd3l1Q9D9H3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mbd3l1Q9D9H3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.33■■□□□ 1.01
Mbd3l1Q9D9H3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mbd3l1Q9D9H3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Mbd3l1Q9D9H3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Mbd3l1Q9D9H3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.32■■□□□ 1
Mbd3l1Q9D9H3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mbd3l1Q9D9H3 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.32■■□□□ 1
Mbd3l1Q9D9H3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Mbd3l1Q9D9H3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mbd3l1Q9D9H3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.31■■□□□ 1
Mbd3l1Q9D9H3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Mbd3l1Q9D9H3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.3■■□□□ 1
Mbd3l1Q9D9H3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Mbd3l1Q9D9H3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mbd3l1Q9D9H3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mbd3l1Q9D9H3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.3■■□□□ 1
Mbd3l1Q9D9H3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.29■■□□□ 1
Mbd3l1Q9D9H3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.28■■□□□ 1
Mbd3l1Q9D9H3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mbd3l1Q9D9H3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.27■■□□□ 1
Mbd3l1Q9D9H3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Mbd3l1Q9D9H3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mbd3l1Q9D9H3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mbd3l1Q9D9H3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mbd3l1Q9D9H3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mbd3l1Q9D9H3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mbd3l1Q9D9H3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mbd3l1Q9D9H3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mbd3l1Q9D9H3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Mbd3l1Q9D9H3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mbd3l1Q9D9H3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mbd3l1Q9D9H3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mbd3l1Q9D9H3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mbd3l1Q9D9H3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mbd3l1Q9D9H3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mbd3l1Q9D9H3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mbd3l1Q9D9H3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mbd3l1Q9D9H3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Mbd3l1Q9D9H3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mbd3l1Q9D9H3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Mbd3l1Q9D9H3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mbd3l1Q9D9H3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mbd3l1Q9D9H3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mbd3l1Q9D9H3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mbd3l1Q9D9H3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mbd3l1Q9D9H3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Mbd3l1Q9D9H3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mbd3l1Q9D9H3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mbd3l1Q9D9H3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mbd3l1Q9D9H3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mbd3l1Q9D9H3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Mbd3l1Q9D9H3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mbd3l1Q9D9H3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mbd3l1Q9D9H3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Mbd3l1Q9D9H3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mbd3l1Q9D9H3 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.14■□□□□ 0.98
Mbd3l1Q9D9H3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
Mbd3l1Q9D9H3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Mbd3l1Q9D9H3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Mbd3l1Q9D9H3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Mbd3l1Q9D9H3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Mbd3l1Q9D9H3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.13■□□□□ 0.97
Mbd3l1Q9D9H3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mbd3l1Q9D9H3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Mbd3l1Q9D9H3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mbd3l1Q9D9H3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mbd3l1Q9D9H3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mbd3l1Q9D9H3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mbd3l1Q9D9H3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mbd3l1Q9D9H3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Mbd3l1Q9D9H3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms