Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Rtl8cQ9D6I0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rtl8cQ9D6I0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Rtl8cQ9D6I0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rtl8cQ9D6I0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
Rtl8cQ9D6I0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rtl8cQ9D6I0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.1■■□□□ 1.13
Rtl8cQ9D6I0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
Rtl8cQ9D6I0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rtl8cQ9D6I0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rtl8cQ9D6I0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Rtl8cQ9D6I0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Rtl8cQ9D6I0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Rtl8cQ9D6I0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.07■■□□□ 1.12
Rtl8cQ9D6I0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Rtl8cQ9D6I0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Rtl8cQ9D6I0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.06■■□□□ 1.12
Rtl8cQ9D6I0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.06■■□□□ 1.12
Rtl8cQ9D6I0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rtl8cQ9D6I0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rtl8cQ9D6I0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rtl8cQ9D6I0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rtl8cQ9D6I0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Rtl8cQ9D6I0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rtl8cQ9D6I0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rtl8cQ9D6I0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rtl8cQ9D6I0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rtl8cQ9D6I0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rtl8cQ9D6I0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rtl8cQ9D6I0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22■■□□□ 1.11
Rtl8cQ9D6I0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rtl8cQ9D6I0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.99■■□□□ 1.11
Rtl8cQ9D6I0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rtl8cQ9D6I0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rtl8cQ9D6I0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rtl8cQ9D6I0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Rtl8cQ9D6I0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rtl8cQ9D6I0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
Rtl8cQ9D6I0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rtl8cQ9D6I0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rtl8cQ9D6I0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rtl8cQ9D6I0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.95■■□□□ 1.11
Rtl8cQ9D6I0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Rtl8cQ9D6I0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rtl8cQ9D6I0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rtl8cQ9D6I0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rtl8cQ9D6I0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Rtl8cQ9D6I0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rtl8cQ9D6I0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rtl8cQ9D6I0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Rtl8cQ9D6I0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rtl8cQ9D6I0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Rtl8cQ9D6I0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.88■■□□□ 1.09
Rtl8cQ9D6I0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.87■■□□□ 1.09
Rtl8cQ9D6I0 Zfp131-205ENSMUST00000223812 663 ntBASIC21.87■■□□□ 1.09
Rtl8cQ9D6I0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtl8cQ9D6I0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtl8cQ9D6I0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtl8cQ9D6I0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtl8cQ9D6I0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtl8cQ9D6I0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.84■■□□□ 1.09
Rtl8cQ9D6I0 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.84■■□□□ 1.09
Rtl8cQ9D6I0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rtl8cQ9D6I0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.83■■□□□ 1.09
Rtl8cQ9D6I0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.83■■□□□ 1.09
Rtl8cQ9D6I0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rtl8cQ9D6I0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rtl8cQ9D6I0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Rtl8cQ9D6I0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rtl8cQ9D6I0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
Rtl8cQ9D6I0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtl8cQ9D6I0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtl8cQ9D6I0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtl8cQ9D6I0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
Rtl8cQ9D6I0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtl8cQ9D6I0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtl8cQ9D6I0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Rtl8cQ9D6I0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rtl8cQ9D6I0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rtl8cQ9D6I0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rtl8cQ9D6I0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rtl8cQ9D6I0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rtl8cQ9D6I0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rtl8cQ9D6I0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtl8cQ9D6I0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rtl8cQ9D6I0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.74■■□□□ 1.07
Rtl8cQ9D6I0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rtl8cQ9D6I0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Rtl8cQ9D6I0 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.72■■□□□ 1.07
Rtl8cQ9D6I0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rtl8cQ9D6I0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.72■■□□□ 1.07
Rtl8cQ9D6I0 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.72■■□□□ 1.07
Rtl8cQ9D6I0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rtl8cQ9D6I0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Rtl8cQ9D6I0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtl8cQ9D6I0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtl8cQ9D6I0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.71■■□□□ 1.07
Rtl8cQ9D6I0 Gm24970-201ENSMUST00000175582 82 ntBASIC21.7■■□□□ 1.06
Rtl8cQ9D6I0 Gm9397-201ENSMUST00000200125 605 ntBASIC21.7■■□□□ 1.06
Rtl8cQ9D6I0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms