Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.9■□□□□ 0.94
Sft2d3Q9CSV6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sft2d3Q9CSV6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sft2d3Q9CSV6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sft2d3Q9CSV6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sft2d3Q9CSV6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sft2d3Q9CSV6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sft2d3Q9CSV6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Sft2d3Q9CSV6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Sft2d3Q9CSV6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sft2d3Q9CSV6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Sft2d3Q9CSV6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sft2d3Q9CSV6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.86■□□□□ 0.93
Sft2d3Q9CSV6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sft2d3Q9CSV6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sft2d3Q9CSV6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sft2d3Q9CSV6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sft2d3Q9CSV6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sft2d3Q9CSV6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sft2d3Q9CSV6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Sft2d3Q9CSV6 Gm24970-201ENSMUST00000175582 82 ntBASIC20.84■□□□□ 0.93
Sft2d3Q9CSV6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.84■□□□□ 0.93
Sft2d3Q9CSV6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sft2d3Q9CSV6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sft2d3Q9CSV6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sft2d3Q9CSV6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Sft2d3Q9CSV6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Sft2d3Q9CSV6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sft2d3Q9CSV6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Sft2d3Q9CSV6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sft2d3Q9CSV6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sft2d3Q9CSV6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Sft2d3Q9CSV6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sft2d3Q9CSV6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sft2d3Q9CSV6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sft2d3Q9CSV6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Sft2d3Q9CSV6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sft2d3Q9CSV6 Amer2-203ENSMUST00000225247 2662 ntBASIC20.78■□□□□ 0.92
Sft2d3Q9CSV6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sft2d3Q9CSV6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sft2d3Q9CSV6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Sft2d3Q9CSV6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sft2d3Q9CSV6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sft2d3Q9CSV6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sft2d3Q9CSV6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sft2d3Q9CSV6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.73■□□□□ 0.91
Sft2d3Q9CSV6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sft2d3Q9CSV6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sft2d3Q9CSV6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sft2d3Q9CSV6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Sft2d3Q9CSV6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sft2d3Q9CSV6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sft2d3Q9CSV6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sft2d3Q9CSV6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sft2d3Q9CSV6 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.7■□□□□ 0.9
Sft2d3Q9CSV6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sft2d3Q9CSV6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sft2d3Q9CSV6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sft2d3Q9CSV6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sft2d3Q9CSV6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sft2d3Q9CSV6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sft2d3Q9CSV6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Sft2d3Q9CSV6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Sft2d3Q9CSV6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sft2d3Q9CSV6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.66■□□□□ 0.9
Sft2d3Q9CSV6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Sft2d3Q9CSV6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Sft2d3Q9CSV6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Sft2d3Q9CSV6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sft2d3Q9CSV6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sft2d3Q9CSV6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.64■□□□□ 0.89
Sft2d3Q9CSV6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Sft2d3Q9CSV6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sft2d3Q9CSV6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sft2d3Q9CSV6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sft2d3Q9CSV6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Sft2d3Q9CSV6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sft2d3Q9CSV6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sft2d3Q9CSV6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.61■□□□□ 0.89
Sft2d3Q9CSV6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sft2d3Q9CSV6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sft2d3Q9CSV6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Sft2d3Q9CSV6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.6■□□□□ 0.89
Sft2d3Q9CSV6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Sft2d3Q9CSV6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sft2d3Q9CSV6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Sft2d3Q9CSV6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sft2d3Q9CSV6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sft2d3Q9CSV6 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.59■□□□□ 0.89
Sft2d3Q9CSV6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.59■□□□□ 0.89
Sft2d3Q9CSV6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sft2d3Q9CSV6 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.58■□□□□ 0.89
Sft2d3Q9CSV6 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.58■□□□□ 0.88
Sft2d3Q9CSV6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sft2d3Q9CSV6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Sft2d3Q9CSV6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sft2d3Q9CSV6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sft2d3Q9CSV6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Sft2d3Q9CSV6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sft2d3Q9CSV6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms