Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Sf3b3Q921M3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Sf3b3Q921M3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Sf3b3Q921M3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Sf3b3Q921M3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
Sf3b3Q921M3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Sf3b3Q921M3 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.93■■■□□ 2.54
Sf3b3Q921M3 Gm42809-201ENSMUST00000198429 1138 ntBASIC30.92■■■□□ 2.54
Sf3b3Q921M3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Sf3b3Q921M3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.91■■■□□ 2.54
Sf3b3Q921M3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Sf3b3Q921M3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Sf3b3Q921M3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Sf3b3Q921M3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Sf3b3Q921M3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Sf3b3Q921M3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.86■■■□□ 2.53
Sf3b3Q921M3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Sf3b3Q921M3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Sf3b3Q921M3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Sf3b3Q921M3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC30.82■■■□□ 2.52
Sf3b3Q921M3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Sf3b3Q921M3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC30.81■■■□□ 2.52
Sf3b3Q921M3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Sf3b3Q921M3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
Sf3b3Q921M3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Sf3b3Q921M3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
Sf3b3Q921M3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Sf3b3Q921M3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Sf3b3Q921M3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC30.76■■■□□ 2.51
Sf3b3Q921M3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Sf3b3Q921M3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Sf3b3Q921M3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Sf3b3Q921M3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Sf3b3Q921M3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Sf3b3Q921M3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Sf3b3Q921M3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30.71■■■□□ 2.51
Sf3b3Q921M3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Sf3b3Q921M3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Sf3b3Q921M3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Sf3b3Q921M3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Sf3b3Q921M3 Nkain2-201ENSMUST00000092602 558 ntBASIC30.7■■■□□ 2.51
Sf3b3Q921M3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Sf3b3Q921M3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Sf3b3Q921M3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Sf3b3Q921M3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
Sf3b3Q921M3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
Sf3b3Q921M3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Sf3b3Q921M3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30.66■■■□□ 2.5
Sf3b3Q921M3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
Sf3b3Q921M3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Sf3b3Q921M3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Sf3b3Q921M3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Sf3b3Q921M3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30.62■■■□□ 2.49
Sf3b3Q921M3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Sf3b3Q921M3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Sf3b3Q921M3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Sf3b3Q921M3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Sf3b3Q921M3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Sf3b3Q921M3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Sf3b3Q921M3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Sf3b3Q921M3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30.53■■■□□ 2.48
Sf3b3Q921M3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC30.53■■■□□ 2.48
Sf3b3Q921M3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Sf3b3Q921M3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Sf3b3Q921M3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30.52■■■□□ 2.48
Sf3b3Q921M3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Sf3b3Q921M3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.5■■■□□ 2.47
Sf3b3Q921M3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Sf3b3Q921M3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Sf3b3Q921M3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Sf3b3Q921M3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Sf3b3Q921M3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30.48■■■□□ 2.47
Sf3b3Q921M3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Sf3b3Q921M3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Sf3b3Q921M3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.46■■■□□ 2.47
Sf3b3Q921M3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Sf3b3Q921M3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
Sf3b3Q921M3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Sf3b3Q921M3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Sf3b3Q921M3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Sf3b3Q921M3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Sf3b3Q921M3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC30.39■■■□□ 2.46
Sf3b3Q921M3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.39■■■□□ 2.45
Sf3b3Q921M3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Sf3b3Q921M3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.37■■■□□ 2.45
Sf3b3Q921M3 Gm7432-201ENSMUST00000210343 879 ntBASIC30.37■■■□□ 2.45
Sf3b3Q921M3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
Sf3b3Q921M3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30.36■■■□□ 2.45
Sf3b3Q921M3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Sf3b3Q921M3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
Sf3b3Q921M3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC30.34■■■□□ 2.45
Sf3b3Q921M3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30.34■■■□□ 2.45
Sf3b3Q921M3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Sf3b3Q921M3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Sf3b3Q921M3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30.3■■■□□ 2.44
Sf3b3Q921M3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Sf3b3Q921M3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC30.29■■■□□ 2.44
Sf3b3Q921M3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Sf3b3Q921M3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Sf3b3Q921M3 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.27■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms