Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdha8Q91Y12 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdha8Q91Y12 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.03■■□□□ 1.44
Pcdha8Q91Y12 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdha8Q91Y12 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdha8Q91Y12 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdha8Q91Y12 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdha8Q91Y12 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
Pcdha8Q91Y12 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdha8Q91Y12 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdha8Q91Y12 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdha8Q91Y12 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdha8Q91Y12 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdha8Q91Y12 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Pcdha8Q91Y12 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdha8Q91Y12 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdha8Q91Y12 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdha8Q91Y12 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdha8Q91Y12 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdha8Q91Y12 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdha8Q91Y12 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdha8Q91Y12 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Pcdha8Q91Y12 Zfp131-205ENSMUST00000223812 663 ntBASIC23.91■■□□□ 1.42
Pcdha8Q91Y12 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha8Q91Y12 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha8Q91Y12 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha8Q91Y12 Amer2-203ENSMUST00000225247 2662 ntBASIC23.9■■□□□ 1.42
Pcdha8Q91Y12 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdha8Q91Y12 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.87■■□□□ 1.41
Pcdha8Q91Y12 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Pcdha8Q91Y12 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdha8Q91Y12 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha8Q91Y12 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha8Q91Y12 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha8Q91Y12 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha8Q91Y12 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdha8Q91Y12 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha8Q91Y12 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha8Q91Y12 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdha8Q91Y12 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.82■■□□□ 1.4
Pcdha8Q91Y12 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha8Q91Y12 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdha8Q91Y12 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdha8Q91Y12 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.81■■□□□ 1.4
Pcdha8Q91Y12 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdha8Q91Y12 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.79■■□□□ 1.4
Pcdha8Q91Y12 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdha8Q91Y12 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdha8Q91Y12 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdha8Q91Y12 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdha8Q91Y12 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.78■■□□□ 1.4
Pcdha8Q91Y12 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
Pcdha8Q91Y12 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.77■■□□□ 1.4
Pcdha8Q91Y12 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdha8Q91Y12 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
Pcdha8Q91Y12 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdha8Q91Y12 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdha8Q91Y12 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdha8Q91Y12 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdha8Q91Y12 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdha8Q91Y12 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdha8Q91Y12 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdha8Q91Y12 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Pcdha8Q91Y12 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdha8Q91Y12 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdha8Q91Y12 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.73■■□□□ 1.39
Pcdha8Q91Y12 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.73■■□□□ 1.39
Pcdha8Q91Y12 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
Pcdha8Q91Y12 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Pcdha8Q91Y12 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.72■■□□□ 1.39
Pcdha8Q91Y12 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Pcdha8Q91Y12 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdha8Q91Y12 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdha8Q91Y12 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdha8Q91Y12 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.7■■□□□ 1.38
Pcdha8Q91Y12 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdha8Q91Y12 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.68■■□□□ 1.38
Pcdha8Q91Y12 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.66■■□□□ 1.38
Pcdha8Q91Y12 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.66■■□□□ 1.38
Pcdha8Q91Y12 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.65■■□□□ 1.38
Pcdha8Q91Y12 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdha8Q91Y12 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Pcdha8Q91Y12 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.38
Pcdha8Q91Y12 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdha8Q91Y12 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.63■■□□□ 1.37
Pcdha8Q91Y12 Gm9397-201ENSMUST00000200125 605 ntBASIC23.63■■□□□ 1.37
Pcdha8Q91Y12 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdha8Q91Y12 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdha8Q91Y12 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdha8Q91Y12 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdha8Q91Y12 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdha8Q91Y12 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Pcdha8Q91Y12 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdha8Q91Y12 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdha8Q91Y12 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.59■■□□□ 1.37
Pcdha8Q91Y12 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdha8Q91Y12 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.58■■□□□ 1.37
Pcdha8Q91Y12 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.58■■□□□ 1.37
Pcdha8Q91Y12 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.57■■□□□ 1.36
Pcdha8Q91Y12 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms