Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rab40cQ8VHQ4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rab40cQ8VHQ4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab40cQ8VHQ4 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.07■□□□□ 0.8
Rab40cQ8VHQ4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab40cQ8VHQ4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab40cQ8VHQ4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab40cQ8VHQ4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Rab40cQ8VHQ4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab40cQ8VHQ4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.05■□□□□ 0.8
Rab40cQ8VHQ4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.05■□□□□ 0.8
Rab40cQ8VHQ4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab40cQ8VHQ4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rab40cQ8VHQ4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rab40cQ8VHQ4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab40cQ8VHQ4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.02■□□□□ 0.8
Rab40cQ8VHQ4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rab40cQ8VHQ4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rab40cQ8VHQ4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rab40cQ8VHQ4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rab40cQ8VHQ4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Rab40cQ8VHQ4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rab40cQ8VHQ4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.99■□□□□ 0.79
Rab40cQ8VHQ4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rab40cQ8VHQ4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rab40cQ8VHQ4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rab40cQ8VHQ4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.97■□□□□ 0.79
Rab40cQ8VHQ4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rab40cQ8VHQ4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rab40cQ8VHQ4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Rab40cQ8VHQ4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rab40cQ8VHQ4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rab40cQ8VHQ4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rab40cQ8VHQ4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.95■□□□□ 0.78
Rab40cQ8VHQ4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Rab40cQ8VHQ4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rab40cQ8VHQ4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rab40cQ8VHQ4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rab40cQ8VHQ4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rab40cQ8VHQ4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.93■□□□□ 0.78
Rab40cQ8VHQ4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rab40cQ8VHQ4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rab40cQ8VHQ4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rab40cQ8VHQ4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rab40cQ8VHQ4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab40cQ8VHQ4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.92■□□□□ 0.78
Rab40cQ8VHQ4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab40cQ8VHQ4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab40cQ8VHQ4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Rab40cQ8VHQ4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab40cQ8VHQ4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab40cQ8VHQ4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab40cQ8VHQ4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rab40cQ8VHQ4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rab40cQ8VHQ4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rab40cQ8VHQ4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rab40cQ8VHQ4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab40cQ8VHQ4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab40cQ8VHQ4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab40cQ8VHQ4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab40cQ8VHQ4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab40cQ8VHQ4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab40cQ8VHQ4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab40cQ8VHQ4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Rab40cQ8VHQ4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rab40cQ8VHQ4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rab40cQ8VHQ4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.85■□□□□ 0.77
Rab40cQ8VHQ4 Gm27322-201ENSMUST00000184007 104 ntBASIC19.85■□□□□ 0.77
Rab40cQ8VHQ4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rab40cQ8VHQ4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab40cQ8VHQ4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Rab40cQ8VHQ4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rab40cQ8VHQ4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rab40cQ8VHQ4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
Rab40cQ8VHQ4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
Rab40cQ8VHQ4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.83■□□□□ 0.76
Rab40cQ8VHQ4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab40cQ8VHQ4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rab40cQ8VHQ4 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.81■□□□□ 0.76
Rab40cQ8VHQ4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab40cQ8VHQ4 Gm26115-201ENSMUST00000175605 87 ntBASIC19.8■□□□□ 0.76
Rab40cQ8VHQ4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab40cQ8VHQ4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab40cQ8VHQ4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rab40cQ8VHQ4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rab40cQ8VHQ4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab40cQ8VHQ4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rab40cQ8VHQ4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rab40cQ8VHQ4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab40cQ8VHQ4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab40cQ8VHQ4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab40cQ8VHQ4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rab40cQ8VHQ4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab40cQ8VHQ4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab40cQ8VHQ4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab40cQ8VHQ4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab40cQ8VHQ4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab40cQ8VHQ4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab40cQ8VHQ4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab40cQ8VHQ4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms