Protein–RNA interactions for Protein: Q8VHI7

Ccdc65, Coiled-coil domain-containing protein 65, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc65Q8VHI7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Ccdc65Q8VHI7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ccdc65Q8VHI7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Ccdc65Q8VHI7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Ccdc65Q8VHI7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Ccdc65Q8VHI7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ccdc65Q8VHI7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ccdc65Q8VHI7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ccdc65Q8VHI7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.96■■□□□ 1.75
Ccdc65Q8VHI7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ccdc65Q8VHI7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ccdc65Q8VHI7 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.95■■□□□ 1.74
Ccdc65Q8VHI7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ccdc65Q8VHI7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ccdc65Q8VHI7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ccdc65Q8VHI7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
Ccdc65Q8VHI7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Ccdc65Q8VHI7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ccdc65Q8VHI7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ccdc65Q8VHI7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ccdc65Q8VHI7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.9■■□□□ 1.74
Ccdc65Q8VHI7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ccdc65Q8VHI7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Ccdc65Q8VHI7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.89■■□□□ 1.74
Ccdc65Q8VHI7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.89■■□□□ 1.74
Ccdc65Q8VHI7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Ccdc65Q8VHI7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Ccdc65Q8VHI7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Ccdc65Q8VHI7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ccdc65Q8VHI7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ccdc65Q8VHI7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ccdc65Q8VHI7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Ccdc65Q8VHI7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
Ccdc65Q8VHI7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ccdc65Q8VHI7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
Ccdc65Q8VHI7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Ccdc65Q8VHI7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ccdc65Q8VHI7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.72
Ccdc65Q8VHI7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Ccdc65Q8VHI7 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.82■■□□□ 1.72
Ccdc65Q8VHI7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc65Q8VHI7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc65Q8VHI7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Ccdc65Q8VHI7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.79■■□□□ 1.72
Ccdc65Q8VHI7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ccdc65Q8VHI7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ccdc65Q8VHI7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ccdc65Q8VHI7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ccdc65Q8VHI7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ccdc65Q8VHI7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Ccdc65Q8VHI7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Ccdc65Q8VHI7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
Ccdc65Q8VHI7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ccdc65Q8VHI7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Ccdc65Q8VHI7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ccdc65Q8VHI7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.73■■□□□ 1.71
Ccdc65Q8VHI7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ccdc65Q8VHI7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.72■■□□□ 1.71
Ccdc65Q8VHI7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ccdc65Q8VHI7 Amer2-203ENSMUST00000225247 2662 ntBASIC25.72■■□□□ 1.71
Ccdc65Q8VHI7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ccdc65Q8VHI7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Ccdc65Q8VHI7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Ccdc65Q8VHI7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ccdc65Q8VHI7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Ccdc65Q8VHI7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.68■■□□□ 1.7
Ccdc65Q8VHI7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ccdc65Q8VHI7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.66■■□□□ 1.7
Ccdc65Q8VHI7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc65Q8VHI7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.66■■□□□ 1.7
Ccdc65Q8VHI7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
Ccdc65Q8VHI7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccdc65Q8VHI7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccdc65Q8VHI7 Gm9397-201ENSMUST00000200125 605 ntBASIC25.64■■□□□ 1.7
Ccdc65Q8VHI7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ccdc65Q8VHI7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ccdc65Q8VHI7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Ccdc65Q8VHI7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC25.61■■□□□ 1.69
Ccdc65Q8VHI7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.61■■□□□ 1.69
Ccdc65Q8VHI7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ccdc65Q8VHI7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Ccdc65Q8VHI7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ccdc65Q8VHI7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Ccdc65Q8VHI7 Gm45855-201ENSMUST00000212546 880 ntBASIC25.59■■□□□ 1.69
Ccdc65Q8VHI7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ccdc65Q8VHI7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ccdc65Q8VHI7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.58■■□□□ 1.69
Ccdc65Q8VHI7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.58■■□□□ 1.69
Ccdc65Q8VHI7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ccdc65Q8VHI7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Ccdc65Q8VHI7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Ccdc65Q8VHI7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.57■■□□□ 1.68
Ccdc65Q8VHI7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ccdc65Q8VHI7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ccdc65Q8VHI7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Ccdc65Q8VHI7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Ccdc65Q8VHI7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Ccdc65Q8VHI7 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.55■■□□□ 1.68
Ccdc65Q8VHI7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Ccdc65Q8VHI7 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.55■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms