Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Nkd2Q8VE28 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Nkd2Q8VE28 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Nkd2Q8VE28 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Nkd2Q8VE28 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Nkd2Q8VE28 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Nkd2Q8VE28 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.35■■□□□ 1.17
Nkd2Q8VE28 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Nkd2Q8VE28 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.35■■□□□ 1.17
Nkd2Q8VE28 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.34■■□□□ 1.17
Nkd2Q8VE28 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Nkd2Q8VE28 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.33■■□□□ 1.17
Nkd2Q8VE28 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Nkd2Q8VE28 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Nkd2Q8VE28 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nkd2Q8VE28 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.31■■□□□ 1.16
Nkd2Q8VE28 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Nkd2Q8VE28 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.3■■□□□ 1.16
Nkd2Q8VE28 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Nkd2Q8VE28 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Nkd2Q8VE28 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Nkd2Q8VE28 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Nkd2Q8VE28 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Nkd2Q8VE28 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nkd2Q8VE28 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nkd2Q8VE28 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nkd2Q8VE28 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
Nkd2Q8VE28 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Nkd2Q8VE28 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nkd2Q8VE28 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Nkd2Q8VE28 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nkd2Q8VE28 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nkd2Q8VE28 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Nkd2Q8VE28 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Nkd2Q8VE28 Amer2-203ENSMUST00000225247 2662 ntBASIC22.21■■□□□ 1.15
Nkd2Q8VE28 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Nkd2Q8VE28 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Nkd2Q8VE28 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Nkd2Q8VE28 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Nkd2Q8VE28 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Nkd2Q8VE28 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Nkd2Q8VE28 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
Nkd2Q8VE28 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Nkd2Q8VE28 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.16■■□□□ 1.14
Nkd2Q8VE28 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Nkd2Q8VE28 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Nkd2Q8VE28 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.13■■□□□ 1.13
Nkd2Q8VE28 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
Nkd2Q8VE28 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.13■■□□□ 1.13
Nkd2Q8VE28 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Nkd2Q8VE28 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Nkd2Q8VE28 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Nkd2Q8VE28 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.11■■□□□ 1.13
Nkd2Q8VE28 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Nkd2Q8VE28 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.1■■□□□ 1.13
Nkd2Q8VE28 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Nkd2Q8VE28 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Nkd2Q8VE28 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.09■■□□□ 1.13
Nkd2Q8VE28 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Nkd2Q8VE28 Gm8503-201ENSMUST00000118131 455 ntBASIC22.08■■□□□ 1.13
Nkd2Q8VE28 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
Nkd2Q8VE28 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.06■■□□□ 1.12
Nkd2Q8VE28 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.06■■□□□ 1.12
Nkd2Q8VE28 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Nkd2Q8VE28 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Nkd2Q8VE28 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nkd2Q8VE28 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
Nkd2Q8VE28 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.05■■□□□ 1.12
Nkd2Q8VE28 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.04■■□□□ 1.12
Nkd2Q8VE28 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Nkd2Q8VE28 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nkd2Q8VE28 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.02■■□□□ 1.12
Nkd2Q8VE28 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Nkd2Q8VE28 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.02■■□□□ 1.11
Nkd2Q8VE28 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.01■■□□□ 1.11
Nkd2Q8VE28 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nkd2Q8VE28 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Nkd2Q8VE28 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nkd2Q8VE28 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Nkd2Q8VE28 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Nkd2Q8VE28 Gm6821-201ENSMUST00000107540 542 ntBASIC21.98■■□□□ 1.11
Nkd2Q8VE28 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.98■■□□□ 1.11
Nkd2Q8VE28 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Nkd2Q8VE28 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Nkd2Q8VE28 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Nkd2Q8VE28 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Nkd2Q8VE28 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Nkd2Q8VE28 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Nkd2Q8VE28 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Nkd2Q8VE28 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.95■■□□□ 1.1
Nkd2Q8VE28 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nkd2Q8VE28 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Nkd2Q8VE28 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.95■■□□□ 1.1
Nkd2Q8VE28 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Nkd2Q8VE28 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Nkd2Q8VE28 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.94■■□□□ 1.1
Nkd2Q8VE28 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Nkd2Q8VE28 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nkd2Q8VE28 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nkd2Q8VE28 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms