Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.72■■□□□ 1.23
H2afjQ8R1M2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
H2afjQ8R1M2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
H2afjQ8R1M2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.72■■□□□ 1.23
H2afjQ8R1M2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
H2afjQ8R1M2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
H2afjQ8R1M2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.71■■□□□ 1.23
H2afjQ8R1M2 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.71■■□□□ 1.23
H2afjQ8R1M2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
H2afjQ8R1M2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
H2afjQ8R1M2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
H2afjQ8R1M2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
H2afjQ8R1M2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
H2afjQ8R1M2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
H2afjQ8R1M2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
H2afjQ8R1M2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
H2afjQ8R1M2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
H2afjQ8R1M2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
H2afjQ8R1M2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
H2afjQ8R1M2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
H2afjQ8R1M2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
H2afjQ8R1M2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
H2afjQ8R1M2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
H2afjQ8R1M2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
H2afjQ8R1M2 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.64■■□□□ 1.21
H2afjQ8R1M2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
H2afjQ8R1M2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.64■■□□□ 1.21
H2afjQ8R1M2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
H2afjQ8R1M2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
H2afjQ8R1M2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
H2afjQ8R1M2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
H2afjQ8R1M2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
H2afjQ8R1M2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
H2afjQ8R1M2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
H2afjQ8R1M2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
H2afjQ8R1M2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.6■■□□□ 1.21
H2afjQ8R1M2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
H2afjQ8R1M2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
H2afjQ8R1M2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
H2afjQ8R1M2 Gm16148-201ENSMUST00000119653 893 ntBASIC22.59■■□□□ 1.21
H2afjQ8R1M2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
H2afjQ8R1M2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
H2afjQ8R1M2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
H2afjQ8R1M2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
H2afjQ8R1M2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
H2afjQ8R1M2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
H2afjQ8R1M2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
H2afjQ8R1M2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
H2afjQ8R1M2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
H2afjQ8R1M2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
H2afjQ8R1M2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
H2afjQ8R1M2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
H2afjQ8R1M2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
H2afjQ8R1M2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
H2afjQ8R1M2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
H2afjQ8R1M2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
H2afjQ8R1M2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.51■■□□□ 1.19
H2afjQ8R1M2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
H2afjQ8R1M2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
H2afjQ8R1M2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
H2afjQ8R1M2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.5■■□□□ 1.19
H2afjQ8R1M2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
H2afjQ8R1M2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
H2afjQ8R1M2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.48■■□□□ 1.19
H2afjQ8R1M2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
H2afjQ8R1M2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.47■■□□□ 1.19
H2afjQ8R1M2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
H2afjQ8R1M2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.46■■□□□ 1.19
H2afjQ8R1M2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
H2afjQ8R1M2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
H2afjQ8R1M2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
H2afjQ8R1M2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
H2afjQ8R1M2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
H2afjQ8R1M2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
H2afjQ8R1M2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
H2afjQ8R1M2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
H2afjQ8R1M2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
H2afjQ8R1M2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
H2afjQ8R1M2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
H2afjQ8R1M2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
H2afjQ8R1M2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
H2afjQ8R1M2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
H2afjQ8R1M2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
H2afjQ8R1M2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
H2afjQ8R1M2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
H2afjQ8R1M2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.38■■□□□ 1.17
H2afjQ8R1M2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
H2afjQ8R1M2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.37■■□□□ 1.17
H2afjQ8R1M2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
H2afjQ8R1M2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
H2afjQ8R1M2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.36■■□□□ 1.17
H2afjQ8R1M2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.36■■□□□ 1.17
H2afjQ8R1M2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
H2afjQ8R1M2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
H2afjQ8R1M2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
H2afjQ8R1M2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
H2afjQ8R1M2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
H2afjQ8R1M2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
H2afjQ8R1M2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
H2afjQ8R1M2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 7.9 ms