Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cystm1Q8K353 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cystm1Q8K353 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cystm1Q8K353 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
Cystm1Q8K353 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cystm1Q8K353 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cystm1Q8K353 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Cystm1Q8K353 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC15.36■□□□□ 0.05
Cystm1Q8K353 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cystm1Q8K353 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cystm1Q8K353 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cystm1Q8K353 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cystm1Q8K353 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cystm1Q8K353 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cystm1Q8K353 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cystm1Q8K353 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cystm1Q8K353 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cystm1Q8K353 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cystm1Q8K353 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cystm1Q8K353 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cystm1Q8K353 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC15.34■□□□□ 0.05
Cystm1Q8K353 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cystm1Q8K353 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cystm1Q8K353 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cystm1Q8K353 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cystm1Q8K353 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cystm1Q8K353 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cystm1Q8K353 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cystm1Q8K353 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cystm1Q8K353 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cystm1Q8K353 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cystm1Q8K353 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cystm1Q8K353 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC15.31■□□□□ 0.04
Cystm1Q8K353 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cystm1Q8K353 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Cystm1Q8K353 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC15.3■□□□□ 0.04
Cystm1Q8K353 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cystm1Q8K353 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cystm1Q8K353 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cystm1Q8K353 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cystm1Q8K353 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cystm1Q8K353 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.28■□□□□ 0.04
Cystm1Q8K353 AC122428.3-201ENSMUST00000215551 2290 ntBASIC15.28■□□□□ 0.04
Cystm1Q8K353 Gm24804-201ENSMUST00000174982 85 ntBASIC15.27■□□□□ 0.04
Cystm1Q8K353 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC15.27■□□□□ 0.04
Cystm1Q8K353 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cystm1Q8K353 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cystm1Q8K353 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC15.26■□□□□ 0.03
Cystm1Q8K353 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cystm1Q8K353 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC15.26■□□□□ 0.03
Cystm1Q8K353 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cystm1Q8K353 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cystm1Q8K353 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cystm1Q8K353 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC15.25■□□□□ 0.03
Cystm1Q8K353 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cystm1Q8K353 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cystm1Q8K353 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cystm1Q8K353 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cystm1Q8K353 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cystm1Q8K353 AC166822.3-201ENSMUST00000227394 661 ntBASIC15.23■□□□□ 0.03
Cystm1Q8K353 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC15.22■□□□□ 0.03
Cystm1Q8K353 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cystm1Q8K353 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cystm1Q8K353 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC15.22■□□□□ 0.03
Cystm1Q8K353 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC15.22■□□□□ 0.03
Cystm1Q8K353 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cystm1Q8K353 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Cystm1Q8K353 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cystm1Q8K353 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cystm1Q8K353 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cystm1Q8K353 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cystm1Q8K353 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cystm1Q8K353 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cystm1Q8K353 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cystm1Q8K353 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Cystm1Q8K353 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cystm1Q8K353 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cystm1Q8K353 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cystm1Q8K353 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cystm1Q8K353 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cystm1Q8K353 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cystm1Q8K353 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.18■□□□□ 0.02
Cystm1Q8K353 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cystm1Q8K353 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cystm1Q8K353 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC15.17■□□□□ 0.02
Cystm1Q8K353 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cystm1Q8K353 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cystm1Q8K353 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cystm1Q8K353 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cystm1Q8K353 AL845457.1-201ENSMUST00000197244 68 ntBASIC15.16■□□□□ 0.02
Cystm1Q8K353 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cystm1Q8K353 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cystm1Q8K353 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cystm1Q8K353 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cystm1Q8K353 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cystm1Q8K353 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC15.15■□□□□ 0.02
Cystm1Q8K353 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cystm1Q8K353 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cystm1Q8K353 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cystm1Q8K353 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms