Protein–RNA interactions for Protein: Q8CJI4

H1fnt, Testis-specific H1 histone, mousemouse

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fntQ8CJI4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
H1fntQ8CJI4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
H1fntQ8CJI4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
H1fntQ8CJI4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
H1fntQ8CJI4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
H1fntQ8CJI4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
H1fntQ8CJI4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
H1fntQ8CJI4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
H1fntQ8CJI4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
H1fntQ8CJI4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
H1fntQ8CJI4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
H1fntQ8CJI4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
H1fntQ8CJI4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.53■■□□□ 1.2
H1fntQ8CJI4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
H1fntQ8CJI4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
H1fntQ8CJI4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
H1fntQ8CJI4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
H1fntQ8CJI4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
H1fntQ8CJI4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
H1fntQ8CJI4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.5■■□□□ 1.19
H1fntQ8CJI4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
H1fntQ8CJI4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.48■■□□□ 1.19
H1fntQ8CJI4 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.48■■□□□ 1.19
H1fntQ8CJI4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
H1fntQ8CJI4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
H1fntQ8CJI4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
H1fntQ8CJI4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
H1fntQ8CJI4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
H1fntQ8CJI4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
H1fntQ8CJI4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
H1fntQ8CJI4 Gm16148-201ENSMUST00000119653 893 ntBASIC22.46■■□□□ 1.19
H1fntQ8CJI4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.46■■□□□ 1.19
H1fntQ8CJI4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
H1fntQ8CJI4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
H1fntQ8CJI4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
H1fntQ8CJI4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
H1fntQ8CJI4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.41■■□□□ 1.18
H1fntQ8CJI4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
H1fntQ8CJI4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
H1fntQ8CJI4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
H1fntQ8CJI4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
H1fntQ8CJI4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
H1fntQ8CJI4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
H1fntQ8CJI4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
H1fntQ8CJI4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.38■■□□□ 1.17
H1fntQ8CJI4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.38■■□□□ 1.17
H1fntQ8CJI4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
H1fntQ8CJI4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
H1fntQ8CJI4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
H1fntQ8CJI4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
H1fntQ8CJI4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
H1fntQ8CJI4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
H1fntQ8CJI4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.37■■□□□ 1.17
H1fntQ8CJI4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
H1fntQ8CJI4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
H1fntQ8CJI4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
H1fntQ8CJI4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
H1fntQ8CJI4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
H1fntQ8CJI4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
H1fntQ8CJI4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
H1fntQ8CJI4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
H1fntQ8CJI4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
H1fntQ8CJI4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
H1fntQ8CJI4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
H1fntQ8CJI4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
H1fntQ8CJI4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
H1fntQ8CJI4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
H1fntQ8CJI4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
H1fntQ8CJI4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
H1fntQ8CJI4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
H1fntQ8CJI4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
H1fntQ8CJI4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
H1fntQ8CJI4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.26■■□□□ 1.15
H1fntQ8CJI4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
H1fntQ8CJI4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
H1fntQ8CJI4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
H1fntQ8CJI4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
H1fntQ8CJI4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
H1fntQ8CJI4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
H1fntQ8CJI4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
H1fntQ8CJI4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
H1fntQ8CJI4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
H1fntQ8CJI4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
H1fntQ8CJI4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
H1fntQ8CJI4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
H1fntQ8CJI4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
H1fntQ8CJI4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
H1fntQ8CJI4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
H1fntQ8CJI4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
H1fntQ8CJI4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
H1fntQ8CJI4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
H1fntQ8CJI4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
H1fntQ8CJI4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
H1fntQ8CJI4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
H1fntQ8CJI4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
H1fntQ8CJI4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
H1fntQ8CJI4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
H1fntQ8CJI4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
H1fntQ8CJI4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
H1fntQ8CJI4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms