Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Pcdhb7Q8CDY9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhb7Q8CDY9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhb7Q8CDY9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhb7Q8CDY9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
Pcdhb7Q8CDY9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Pcdhb7Q8CDY9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.6■■□□□ 1.53
Pcdhb7Q8CDY9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhb7Q8CDY9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhb7Q8CDY9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhb7Q8CDY9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb7Q8CDY9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb7Q8CDY9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb7Q8CDY9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb7Q8CDY9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhb7Q8CDY9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhb7Q8CDY9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhb7Q8CDY9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb7Q8CDY9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb7Q8CDY9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhb7Q8CDY9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhb7Q8CDY9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.55■■□□□ 1.52
Pcdhb7Q8CDY9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Pcdhb7Q8CDY9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhb7Q8CDY9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb7Q8CDY9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.51■■□□□ 1.51
Pcdhb7Q8CDY9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb7Q8CDY9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhb7Q8CDY9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhb7Q8CDY9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Pcdhb7Q8CDY9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhb7Q8CDY9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhb7Q8CDY9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Pcdhb7Q8CDY9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Pcdhb7Q8CDY9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhb7Q8CDY9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb7Q8CDY9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhb7Q8CDY9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Pcdhb7Q8CDY9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.45■■□□□ 1.5
Pcdhb7Q8CDY9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhb7Q8CDY9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Pcdhb7Q8CDY9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb7Q8CDY9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb7Q8CDY9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb7Q8CDY9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Pcdhb7Q8CDY9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.41■■□□□ 1.5
Pcdhb7Q8CDY9 Zfp131-205ENSMUST00000223812 663 ntBASIC24.41■■□□□ 1.5
Pcdhb7Q8CDY9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb7Q8CDY9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb7Q8CDY9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb7Q8CDY9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.39■■□□□ 1.49
Pcdhb7Q8CDY9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhb7Q8CDY9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.39■■□□□ 1.49
Pcdhb7Q8CDY9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb7Q8CDY9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb7Q8CDY9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb7Q8CDY9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb7Q8CDY9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.37■■□□□ 1.49
Pcdhb7Q8CDY9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb7Q8CDY9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb7Q8CDY9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb7Q8CDY9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhb7Q8CDY9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhb7Q8CDY9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb7Q8CDY9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb7Q8CDY9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.35■■□□□ 1.49
Pcdhb7Q8CDY9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb7Q8CDY9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb7Q8CDY9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Pcdhb7Q8CDY9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhb7Q8CDY9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhb7Q8CDY9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.33■■□□□ 1.49
Pcdhb7Q8CDY9 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.33■■□□□ 1.49
Pcdhb7Q8CDY9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.33■■□□□ 1.48
Pcdhb7Q8CDY9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.32■■□□□ 1.48
Pcdhb7Q8CDY9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.32■■□□□ 1.48
Pcdhb7Q8CDY9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb7Q8CDY9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb7Q8CDY9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb7Q8CDY9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb7Q8CDY9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
Pcdhb7Q8CDY9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhb7Q8CDY9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhb7Q8CDY9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhb7Q8CDY9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhb7Q8CDY9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhb7Q8CDY9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.28■■□□□ 1.48
Pcdhb7Q8CDY9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhb7Q8CDY9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.27■■□□□ 1.48
Pcdhb7Q8CDY9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhb7Q8CDY9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhb7Q8CDY9 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.26■■□□□ 1.47
Pcdhb7Q8CDY9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhb7Q8CDY9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhb7Q8CDY9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhb7Q8CDY9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhb7Q8CDY9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhb7Q8CDY9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhb7Q8CDY9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.22■■□□□ 1.47
Pcdhb7Q8CDY9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms