Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smim4Q8C1Q6 Amer2-203ENSMUST00000225247 2662 ntBASIC20.59■□□□□ 0.89
Smim4Q8C1Q6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.59■□□□□ 0.89
Smim4Q8C1Q6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smim4Q8C1Q6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smim4Q8C1Q6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Smim4Q8C1Q6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smim4Q8C1Q6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Smim4Q8C1Q6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smim4Q8C1Q6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smim4Q8C1Q6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Smim4Q8C1Q6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Smim4Q8C1Q6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Smim4Q8C1Q6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smim4Q8C1Q6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smim4Q8C1Q6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smim4Q8C1Q6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smim4Q8C1Q6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smim4Q8C1Q6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smim4Q8C1Q6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smim4Q8C1Q6 Gm16148-201ENSMUST00000119653 893 ntBASIC20.5■□□□□ 0.87
Smim4Q8C1Q6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smim4Q8C1Q6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smim4Q8C1Q6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smim4Q8C1Q6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smim4Q8C1Q6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smim4Q8C1Q6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smim4Q8C1Q6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smim4Q8C1Q6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Smim4Q8C1Q6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smim4Q8C1Q6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smim4Q8C1Q6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smim4Q8C1Q6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smim4Q8C1Q6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smim4Q8C1Q6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Smim4Q8C1Q6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smim4Q8C1Q6 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.45■□□□□ 0.86
Smim4Q8C1Q6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smim4Q8C1Q6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.44■□□□□ 0.86
Smim4Q8C1Q6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.44■□□□□ 0.86
Smim4Q8C1Q6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smim4Q8C1Q6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smim4Q8C1Q6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Smim4Q8C1Q6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smim4Q8C1Q6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smim4Q8C1Q6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smim4Q8C1Q6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smim4Q8C1Q6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smim4Q8C1Q6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Smim4Q8C1Q6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.39■□□□□ 0.86
Smim4Q8C1Q6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Smim4Q8C1Q6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smim4Q8C1Q6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smim4Q8C1Q6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smim4Q8C1Q6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smim4Q8C1Q6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.37■□□□□ 0.85
Smim4Q8C1Q6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smim4Q8C1Q6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.36■□□□□ 0.85
Smim4Q8C1Q6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smim4Q8C1Q6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smim4Q8C1Q6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.36■□□□□ 0.85
Smim4Q8C1Q6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smim4Q8C1Q6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smim4Q8C1Q6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.35■□□□□ 0.85
Smim4Q8C1Q6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.35■□□□□ 0.85
Smim4Q8C1Q6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smim4Q8C1Q6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smim4Q8C1Q6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smim4Q8C1Q6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smim4Q8C1Q6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.33■□□□□ 0.85
Smim4Q8C1Q6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smim4Q8C1Q6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Smim4Q8C1Q6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smim4Q8C1Q6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smim4Q8C1Q6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smim4Q8C1Q6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smim4Q8C1Q6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smim4Q8C1Q6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smim4Q8C1Q6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smim4Q8C1Q6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smim4Q8C1Q6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smim4Q8C1Q6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smim4Q8C1Q6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smim4Q8C1Q6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.28■□□□□ 0.84
Smim4Q8C1Q6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smim4Q8C1Q6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smim4Q8C1Q6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smim4Q8C1Q6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Smim4Q8C1Q6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smim4Q8C1Q6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smim4Q8C1Q6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smim4Q8C1Q6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smim4Q8C1Q6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smim4Q8C1Q6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smim4Q8C1Q6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smim4Q8C1Q6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smim4Q8C1Q6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smim4Q8C1Q6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smim4Q8C1Q6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smim4Q8C1Q6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms