Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Sh3rf3Q8C120 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Sh3rf3Q8C120 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Sh3rf3Q8C120 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Sh3rf3Q8C120 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Sh3rf3Q8C120 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Sh3rf3Q8C120 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Sh3rf3Q8C120 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Sh3rf3Q8C120 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Sh3rf3Q8C120 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Sh3rf3Q8C120 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Sh3rf3Q8C120 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Sh3rf3Q8C120 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Sh3rf3Q8C120 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Sh3rf3Q8C120 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Sh3rf3Q8C120 Zfp131-205ENSMUST00000223812 663 ntBASIC25.81■■□□□ 1.72
Sh3rf3Q8C120 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Sh3rf3Q8C120 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.8■■□□□ 1.72
Sh3rf3Q8C120 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Sh3rf3Q8C120 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Sh3rf3Q8C120 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Sh3rf3Q8C120 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Sh3rf3Q8C120 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Sh3rf3Q8C120 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Sh3rf3Q8C120 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Sh3rf3Q8C120 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Sh3rf3Q8C120 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Sh3rf3Q8C120 Amer2-203ENSMUST00000225247 2662 ntBASIC25.75■■□□□ 1.71
Sh3rf3Q8C120 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
Sh3rf3Q8C120 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.74■■□□□ 1.71
Sh3rf3Q8C120 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Sh3rf3Q8C120 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.73■■□□□ 1.71
Sh3rf3Q8C120 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Sh3rf3Q8C120 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.73■■□□□ 1.71
Sh3rf3Q8C120 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Sh3rf3Q8C120 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Sh3rf3Q8C120 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Sh3rf3Q8C120 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.71■■□□□ 1.71
Sh3rf3Q8C120 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.71■■□□□ 1.71
Sh3rf3Q8C120 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Sh3rf3Q8C120 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Sh3rf3Q8C120 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Sh3rf3Q8C120 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Sh3rf3Q8C120 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Sh3rf3Q8C120 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.7■■□□□ 1.7
Sh3rf3Q8C120 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Sh3rf3Q8C120 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Sh3rf3Q8C120 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.69■■□□□ 1.7
Sh3rf3Q8C120 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sh3rf3Q8C120 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sh3rf3Q8C120 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Sh3rf3Q8C120 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Sh3rf3Q8C120 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Sh3rf3Q8C120 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Sh3rf3Q8C120 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Sh3rf3Q8C120 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.64■■□□□ 1.7
Sh3rf3Q8C120 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Sh3rf3Q8C120 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Sh3rf3Q8C120 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Sh3rf3Q8C120 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Sh3rf3Q8C120 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.63■■□□□ 1.69
Sh3rf3Q8C120 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.63■■□□□ 1.69
Sh3rf3Q8C120 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.62■■□□□ 1.69
Sh3rf3Q8C120 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
Sh3rf3Q8C120 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Sh3rf3Q8C120 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Sh3rf3Q8C120 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.58■■□□□ 1.69
Sh3rf3Q8C120 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Sh3rf3Q8C120 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Sh3rf3Q8C120 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.57■■□□□ 1.68
Sh3rf3Q8C120 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Sh3rf3Q8C120 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Sh3rf3Q8C120 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Sh3rf3Q8C120 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Sh3rf3Q8C120 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Sh3rf3Q8C120 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Sh3rf3Q8C120 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Sh3rf3Q8C120 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Sh3rf3Q8C120 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Sh3rf3Q8C120 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Sh3rf3Q8C120 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Sh3rf3Q8C120 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Sh3rf3Q8C120 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
Sh3rf3Q8C120 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Sh3rf3Q8C120 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.5■■□□□ 1.67
Sh3rf3Q8C120 Gm9397-201ENSMUST00000200125 605 ntBASIC25.5■■□□□ 1.67
Sh3rf3Q8C120 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.5■■□□□ 1.67
Sh3rf3Q8C120 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Sh3rf3Q8C120 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.49■■□□□ 1.67
Sh3rf3Q8C120 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Sh3rf3Q8C120 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
Sh3rf3Q8C120 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
Sh3rf3Q8C120 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
Sh3rf3Q8C120 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Sh3rf3Q8C120 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Sh3rf3Q8C120 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
Sh3rf3Q8C120 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Sh3rf3Q8C120 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
Sh3rf3Q8C120 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Sh3rf3Q8C120 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms