Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Fam43aQ8BUP8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Fam43aQ8BUP8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.92■■□□□ 1.9
Fam43aQ8BUP8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Fam43aQ8BUP8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Fam43aQ8BUP8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26.92■■□□□ 1.9
Fam43aQ8BUP8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Fam43aQ8BUP8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Fam43aQ8BUP8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Fam43aQ8BUP8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Fam43aQ8BUP8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Fam43aQ8BUP8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Fam43aQ8BUP8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.87■■□□□ 1.89
Fam43aQ8BUP8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Fam43aQ8BUP8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Fam43aQ8BUP8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Fam43aQ8BUP8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Fam43aQ8BUP8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Fam43aQ8BUP8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
Fam43aQ8BUP8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Fam43aQ8BUP8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Fam43aQ8BUP8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Fam43aQ8BUP8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Fam43aQ8BUP8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
Fam43aQ8BUP8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
Fam43aQ8BUP8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.82■■□□□ 1.88
Fam43aQ8BUP8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Fam43aQ8BUP8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
Fam43aQ8BUP8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Fam43aQ8BUP8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Fam43aQ8BUP8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Fam43aQ8BUP8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Fam43aQ8BUP8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Fam43aQ8BUP8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
Fam43aQ8BUP8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Fam43aQ8BUP8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.76■■□□□ 1.87
Fam43aQ8BUP8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Fam43aQ8BUP8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.75■■□□□ 1.87
Fam43aQ8BUP8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.75■■□□□ 1.87
Fam43aQ8BUP8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Fam43aQ8BUP8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
Fam43aQ8BUP8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.73■■□□□ 1.87
Fam43aQ8BUP8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Fam43aQ8BUP8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Fam43aQ8BUP8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Fam43aQ8BUP8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Fam43aQ8BUP8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Fam43aQ8BUP8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Fam43aQ8BUP8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Fam43aQ8BUP8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Fam43aQ8BUP8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
Fam43aQ8BUP8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Fam43aQ8BUP8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Fam43aQ8BUP8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Fam43aQ8BUP8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Fam43aQ8BUP8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC26.69■■□□□ 1.86
Fam43aQ8BUP8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Fam43aQ8BUP8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Fam43aQ8BUP8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Fam43aQ8BUP8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Fam43aQ8BUP8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
Fam43aQ8BUP8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Fam43aQ8BUP8 Zfp131-205ENSMUST00000223812 663 ntBASIC26.68■■□□□ 1.86
Fam43aQ8BUP8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Fam43aQ8BUP8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Fam43aQ8BUP8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Fam43aQ8BUP8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Fam43aQ8BUP8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Fam43aQ8BUP8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Fam43aQ8BUP8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Fam43aQ8BUP8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Fam43aQ8BUP8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Fam43aQ8BUP8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Fam43aQ8BUP8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Fam43aQ8BUP8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
Fam43aQ8BUP8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Fam43aQ8BUP8 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.63■■□□□ 1.85
Fam43aQ8BUP8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Fam43aQ8BUP8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Fam43aQ8BUP8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Fam43aQ8BUP8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26.6■■□□□ 1.85
Fam43aQ8BUP8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Fam43aQ8BUP8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Fam43aQ8BUP8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.6■■□□□ 1.85
Fam43aQ8BUP8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Fam43aQ8BUP8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Fam43aQ8BUP8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
Fam43aQ8BUP8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.84
Fam43aQ8BUP8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Fam43aQ8BUP8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.57■■□□□ 1.84
Fam43aQ8BUP8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Fam43aQ8BUP8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Fam43aQ8BUP8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
Fam43aQ8BUP8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Fam43aQ8BUP8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Fam43aQ8BUP8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
Fam43aQ8BUP8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Fam43aQ8BUP8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Fam43aQ8BUP8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.54■■□□□ 1.84
Fam43aQ8BUP8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms