Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc5a7Q8BGY9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Slc5a7Q8BGY9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slc5a7Q8BGY9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc5a7Q8BGY9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc5a7Q8BGY9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Slc5a7Q8BGY9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc5a7Q8BGY9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.65■■□□□ 1.06
Slc5a7Q8BGY9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc5a7Q8BGY9 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.63■■□□□ 1.05
Slc5a7Q8BGY9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc5a7Q8BGY9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Slc5a7Q8BGY9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Slc5a7Q8BGY9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.63■■□□□ 1.05
Slc5a7Q8BGY9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc5a7Q8BGY9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Slc5a7Q8BGY9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc5a7Q8BGY9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc5a7Q8BGY9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
Slc5a7Q8BGY9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
Slc5a7Q8BGY9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Slc5a7Q8BGY9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.58■■□□□ 1.05
Slc5a7Q8BGY9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc5a7Q8BGY9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc5a7Q8BGY9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc5a7Q8BGY9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.56■■□□□ 1.04
Slc5a7Q8BGY9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc5a7Q8BGY9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Slc5a7Q8BGY9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Slc5a7Q8BGY9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc5a7Q8BGY9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc5a7Q8BGY9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc5a7Q8BGY9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc5a7Q8BGY9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Slc5a7Q8BGY9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Slc5a7Q8BGY9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
Slc5a7Q8BGY9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc5a7Q8BGY9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc5a7Q8BGY9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc5a7Q8BGY9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Slc5a7Q8BGY9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc5a7Q8BGY9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc5a7Q8BGY9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc5a7Q8BGY9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc5a7Q8BGY9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.49■■□□□ 1.03
Slc5a7Q8BGY9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Slc5a7Q8BGY9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Slc5a7Q8BGY9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc5a7Q8BGY9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.47■■□□□ 1.03
Slc5a7Q8BGY9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc5a7Q8BGY9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Slc5a7Q8BGY9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slc5a7Q8BGY9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Slc5a7Q8BGY9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc5a7Q8BGY9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc5a7Q8BGY9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc5a7Q8BGY9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Slc5a7Q8BGY9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.42■■□□□ 1.02
Slc5a7Q8BGY9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.42■■□□□ 1.02
Slc5a7Q8BGY9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Slc5a7Q8BGY9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slc5a7Q8BGY9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc5a7Q8BGY9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Slc5a7Q8BGY9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc5a7Q8BGY9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc5a7Q8BGY9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc5a7Q8BGY9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Slc5a7Q8BGY9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc5a7Q8BGY9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc5a7Q8BGY9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc5a7Q8BGY9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Slc5a7Q8BGY9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Slc5a7Q8BGY9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc5a7Q8BGY9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc5a7Q8BGY9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc5a7Q8BGY9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Slc5a7Q8BGY9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc5a7Q8BGY9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Slc5a7Q8BGY9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Slc5a7Q8BGY9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc5a7Q8BGY9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc5a7Q8BGY9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc5a7Q8BGY9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc5a7Q8BGY9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Slc5a7Q8BGY9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc5a7Q8BGY9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.3■■□□□ 1
Slc5a7Q8BGY9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc5a7Q8BGY9 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.29■■□□□ 1
Slc5a7Q8BGY9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.28■■□□□ 1
Slc5a7Q8BGY9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Slc5a7Q8BGY9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc5a7Q8BGY9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Slc5a7Q8BGY9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.28■■□□□ 1
Slc5a7Q8BGY9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Slc5a7Q8BGY9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Slc5a7Q8BGY9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Slc5a7Q8BGY9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc5a7Q8BGY9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc5a7Q8BGY9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc5a7Q8BGY9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms