Protein–RNA interactions for Protein: Q7TN05

Ap1s3, AP-1 complex subunit sigma-3, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap1s3Q7TN05 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.45■■□□□ 1.02
Ap1s3Q7TN05 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.44■■□□□ 1.02
Ap1s3Q7TN05 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ap1s3Q7TN05 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ap1s3Q7TN05 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ap1s3Q7TN05 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ap1s3Q7TN05 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ap1s3Q7TN05 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ap1s3Q7TN05 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Ap1s3Q7TN05 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ap1s3Q7TN05 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.42■■□□□ 1.02
Ap1s3Q7TN05 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ap1s3Q7TN05 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ap1s3Q7TN05 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.39■■□□□ 1.01
Ap1s3Q7TN05 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ap1s3Q7TN05 Mipep-204ENSMUST00000225043 1548 ntBASIC21.39■■□□□ 1.01
Ap1s3Q7TN05 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ap1s3Q7TN05 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ap1s3Q7TN05 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.38■■□□□ 1.01
Ap1s3Q7TN05 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ap1s3Q7TN05 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ap1s3Q7TN05 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ap1s3Q7TN05 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ap1s3Q7TN05 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ap1s3Q7TN05 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ap1s3Q7TN05 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ap1s3Q7TN05 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.35■■□□□ 1.01
Ap1s3Q7TN05 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ap1s3Q7TN05 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Ap1s3Q7TN05 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ap1s3Q7TN05 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ap1s3Q7TN05 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.33■■□□□ 1
Ap1s3Q7TN05 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.33■■□□□ 1
Ap1s3Q7TN05 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Ap1s3Q7TN05 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ap1s3Q7TN05 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ap1s3Q7TN05 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ap1s3Q7TN05 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
Ap1s3Q7TN05 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Ap1s3Q7TN05 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.3■■□□□ 1
Ap1s3Q7TN05 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.3■■□□□ 1
Ap1s3Q7TN05 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ap1s3Q7TN05 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ap1s3Q7TN05 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ap1s3Q7TN05 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ap1s3Q7TN05 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ap1s3Q7TN05 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
Ap1s3Q7TN05 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Ap1s3Q7TN05 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.27■□□□□ 0.99
Ap1s3Q7TN05 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Ap1s3Q7TN05 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ap1s3Q7TN05 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.25■□□□□ 0.99
Ap1s3Q7TN05 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Ap1s3Q7TN05 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ap1s3Q7TN05 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ap1s3Q7TN05 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ap1s3Q7TN05 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.24■□□□□ 0.99
Ap1s3Q7TN05 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ap1s3Q7TN05 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Ap1s3Q7TN05 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ap1s3Q7TN05 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ap1s3Q7TN05 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ap1s3Q7TN05 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ap1s3Q7TN05 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ap1s3Q7TN05 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ap1s3Q7TN05 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ap1s3Q7TN05 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ap1s3Q7TN05 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ap1s3Q7TN05 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ap1s3Q7TN05 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ap1s3Q7TN05 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ap1s3Q7TN05 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ap1s3Q7TN05 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ap1s3Q7TN05 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ap1s3Q7TN05 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ap1s3Q7TN05 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.18■□□□□ 0.98
Ap1s3Q7TN05 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ap1s3Q7TN05 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ap1s3Q7TN05 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ap1s3Q7TN05 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ap1s3Q7TN05 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ap1s3Q7TN05 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ap1s3Q7TN05 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ap1s3Q7TN05 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ap1s3Q7TN05 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ap1s3Q7TN05 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ap1s3Q7TN05 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ap1s3Q7TN05 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ap1s3Q7TN05 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ap1s3Q7TN05 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ap1s3Q7TN05 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.14■□□□□ 0.97
Ap1s3Q7TN05 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ap1s3Q7TN05 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ap1s3Q7TN05 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ap1s3Q7TN05 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ap1s3Q7TN05 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ap1s3Q7TN05 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ap1s3Q7TN05 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ap1s3Q7TN05 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ap1s3Q7TN05 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms