Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vma21Q78T54 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vma21Q78T54 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vma21Q78T54 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vma21Q78T54 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Vma21Q78T54 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vma21Q78T54 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vma21Q78T54 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vma21Q78T54 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Vma21Q78T54 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vma21Q78T54 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vma21Q78T54 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.99■□□□□ 0.79
Vma21Q78T54 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vma21Q78T54 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vma21Q78T54 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vma21Q78T54 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vma21Q78T54 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vma21Q78T54 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vma21Q78T54 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.96■□□□□ 0.79
Vma21Q78T54 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vma21Q78T54 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.95■□□□□ 0.78
Vma21Q78T54 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vma21Q78T54 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Vma21Q78T54 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vma21Q78T54 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vma21Q78T54 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vma21Q78T54 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vma21Q78T54 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vma21Q78T54 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.9■□□□□ 0.78
Vma21Q78T54 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.89■□□□□ 0.77
Vma21Q78T54 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vma21Q78T54 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vma21Q78T54 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vma21Q78T54 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Vma21Q78T54 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vma21Q78T54 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vma21Q78T54 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Vma21Q78T54 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.86■□□□□ 0.77
Vma21Q78T54 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vma21Q78T54 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Vma21Q78T54 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.85■□□□□ 0.77
Vma21Q78T54 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Vma21Q78T54 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Vma21Q78T54 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vma21Q78T54 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vma21Q78T54 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vma21Q78T54 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vma21Q78T54 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Vma21Q78T54 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Vma21Q78T54 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vma21Q78T54 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.82■□□□□ 0.76
Vma21Q78T54 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Vma21Q78T54 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vma21Q78T54 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vma21Q78T54 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vma21Q78T54 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.82■□□□□ 0.76
Vma21Q78T54 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vma21Q78T54 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vma21Q78T54 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vma21Q78T54 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.78■□□□□ 0.76
Vma21Q78T54 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vma21Q78T54 Gm24804-201ENSMUST00000174982 85 ntBASIC19.77■□□□□ 0.76
Vma21Q78T54 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vma21Q78T54 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vma21Q78T54 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vma21Q78T54 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Vma21Q78T54 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vma21Q78T54 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Vma21Q78T54 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vma21Q78T54 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vma21Q78T54 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Vma21Q78T54 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vma21Q78T54 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vma21Q78T54 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vma21Q78T54 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vma21Q78T54 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Vma21Q78T54 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vma21Q78T54 Gm16148-201ENSMUST00000119653 893 ntBASIC19.72■□□□□ 0.75
Vma21Q78T54 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vma21Q78T54 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Vma21Q78T54 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Vma21Q78T54 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vma21Q78T54 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vma21Q78T54 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vma21Q78T54 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vma21Q78T54 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vma21Q78T54 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vma21Q78T54 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vma21Q78T54 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.68■□□□□ 0.74
Vma21Q78T54 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Vma21Q78T54 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vma21Q78T54 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vma21Q78T54 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vma21Q78T54 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vma21Q78T54 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vma21Q78T54 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vma21Q78T54 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vma21Q78T54 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vma21Q78T54 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vma21Q78T54 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms