Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Gm11175-201ENSMUST00000116172 543 ntBASIC8.52□□□□□ -1.05
Syne1Q6ZWR6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC8.51□□□□□ -1.05
Syne1Q6ZWR6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Syne1Q6ZWR6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Syne1Q6ZWR6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC8.51□□□□□ -1.05
Syne1Q6ZWR6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC8.51□□□□□ -1.05
Syne1Q6ZWR6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Syne1Q6ZWR6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC8.51□□□□□ -1.05
Syne1Q6ZWR6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Syne1Q6ZWR6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Syne1Q6ZWR6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Syne1Q6ZWR6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Syne1Q6ZWR6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Syne1Q6ZWR6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Syne1Q6ZWR6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC8.49□□□□□ -1.05
Syne1Q6ZWR6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Syne1Q6ZWR6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC8.49□□□□□ -1.05
Syne1Q6ZWR6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Syne1Q6ZWR6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC8.49□□□□□ -1.05
Syne1Q6ZWR6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Syne1Q6ZWR6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Syne1Q6ZWR6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC8.49□□□□□ -1.05
Syne1Q6ZWR6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Syne1Q6ZWR6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Syne1Q6ZWR6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Syne1Q6ZWR6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Syne1Q6ZWR6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC8.48□□□□□ -1.05
Syne1Q6ZWR6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Syne1Q6ZWR6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Syne1Q6ZWR6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Syne1Q6ZWR6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Syne1Q6ZWR6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Syne1Q6ZWR6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Syne1Q6ZWR6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Syne1Q6ZWR6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Syne1Q6ZWR6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
Syne1Q6ZWR6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Syne1Q6ZWR6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Syne1Q6ZWR6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Syne1Q6ZWR6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Syne1Q6ZWR6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC8.46□□□□□ -1.06
Syne1Q6ZWR6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC8.46□□□□□ -1.06
Syne1Q6ZWR6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Syne1Q6ZWR6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Syne1Q6ZWR6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Syne1Q6ZWR6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Syne1Q6ZWR6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Syne1Q6ZWR6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Syne1Q6ZWR6 Mir6538-201ENSMUST00000183713 110 ntBASIC8.45□□□□□ -1.06
Syne1Q6ZWR6 Gm7432-201ENSMUST00000210343 879 ntBASIC8.44□□□□□ -1.06
Syne1Q6ZWR6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC8.44□□□□□ -1.06
Syne1Q6ZWR6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Syne1Q6ZWR6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Syne1Q6ZWR6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Syne1Q6ZWR6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Syne1Q6ZWR6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC8.43□□□□□ -1.06
Syne1Q6ZWR6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Syne1Q6ZWR6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Syne1Q6ZWR6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC8.42□□□□□ -1.06
Syne1Q6ZWR6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Syne1Q6ZWR6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC8.42□□□□□ -1.06
Syne1Q6ZWR6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Syne1Q6ZWR6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Syne1Q6ZWR6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Syne1Q6ZWR6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Syne1Q6ZWR6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Syne1Q6ZWR6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Syne1Q6ZWR6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Syne1Q6ZWR6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Syne1Q6ZWR6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Syne1Q6ZWR6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Syne1Q6ZWR6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Syne1Q6ZWR6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Syne1Q6ZWR6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Syne1Q6ZWR6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Syne1Q6ZWR6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Syne1Q6ZWR6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
Syne1Q6ZWR6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Syne1Q6ZWR6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC8.39□□□□□ -1.07
Syne1Q6ZWR6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Syne1Q6ZWR6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Syne1Q6ZWR6 Gm11599-201ENSMUST00000118720 878 ntBASIC8.39□□□□□ -1.07
Syne1Q6ZWR6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Syne1Q6ZWR6 Nkain2-201ENSMUST00000092602 558 ntBASIC8.39□□□□□ -1.07
Syne1Q6ZWR6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Syne1Q6ZWR6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC8.38□□□□□ -1.07
Syne1Q6ZWR6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Syne1Q6ZWR6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Syne1Q6ZWR6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Syne1Q6ZWR6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Syne1Q6ZWR6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Syne1Q6ZWR6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Syne1Q6ZWR6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Syne1Q6ZWR6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
Syne1Q6ZWR6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Syne1Q6ZWR6 Gm6658-202ENSMUST00000209493 1885 ntBASIC8.36□□□□□ -1.07
Syne1Q6ZWR6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Syne1Q6ZWR6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC8.35□□□□□ -1.07
Syne1Q6ZWR6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Syne1Q6ZWR6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms