Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ndufa4Q62425 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ndufa4Q62425 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ndufa4Q62425 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ndufa4Q62425 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ndufa4Q62425 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ndufa4Q62425 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.83■□□□□ 0.44
Ndufa4Q62425 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17.81■□□□□ 0.44
Ndufa4Q62425 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.81■□□□□ 0.44
Ndufa4Q62425 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndufa4Q62425 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ndufa4Q62425 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ndufa4Q62425 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ndufa4Q62425 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndufa4Q62425 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndufa4Q62425 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndufa4Q62425 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ndufa4Q62425 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndufa4Q62425 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndufa4Q62425 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndufa4Q62425 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndufa4Q62425 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndufa4Q62425 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndufa4Q62425 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ndufa4Q62425 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.77■□□□□ 0.44
Ndufa4Q62425 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ndufa4Q62425 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndufa4Q62425 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.75■□□□□ 0.43
Ndufa4Q62425 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ndufa4Q62425 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ndufa4Q62425 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ndufa4Q62425 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ndufa4Q62425 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ndufa4Q62425 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ndufa4Q62425 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ndufa4Q62425 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ndufa4Q62425 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ndufa4Q62425 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ndufa4Q62425 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndufa4Q62425 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.71■□□□□ 0.43
Ndufa4Q62425 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndufa4Q62425 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndufa4Q62425 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.7■□□□□ 0.42
Ndufa4Q62425 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndufa4Q62425 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndufa4Q62425 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndufa4Q62425 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ndufa4Q62425 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndufa4Q62425 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.69■□□□□ 0.42
Ndufa4Q62425 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.69■□□□□ 0.42
Ndufa4Q62425 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndufa4Q62425 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndufa4Q62425 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndufa4Q62425 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndufa4Q62425 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ndufa4Q62425 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndufa4Q62425 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndufa4Q62425 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ndufa4Q62425 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Ndufa4Q62425 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ndufa4Q62425 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ndufa4Q62425 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndufa4Q62425 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndufa4Q62425 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ndufa4Q62425 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ndufa4Q62425 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndufa4Q62425 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndufa4Q62425 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ndufa4Q62425 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufa4Q62425 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufa4Q62425 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufa4Q62425 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndufa4Q62425 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ndufa4Q62425 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndufa4Q62425 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Ndufa4Q62425 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndufa4Q62425 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndufa4Q62425 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndufa4Q62425 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndufa4Q62425 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndufa4Q62425 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ndufa4Q62425 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ndufa4Q62425 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ndufa4Q62425 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ndufa4Q62425 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Ndufa4Q62425 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ndufa4Q62425 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufa4Q62425 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufa4Q62425 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufa4Q62425 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufa4Q62425 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufa4Q62425 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ndufa4Q62425 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ndufa4Q62425 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ndufa4Q62425 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndufa4Q62425 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ndufa4Q62425 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndufa4Q62425 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC17.54■□□□□ 0.4
Ndufa4Q62425 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.54■□□□□ 0.4
Ndufa4Q62425 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms