Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ripk1Q60855 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ripk1Q60855 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ripk1Q60855 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ripk1Q60855 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ripk1Q60855 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ripk1Q60855 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.24■■□□□ 1.31
Ripk1Q60855 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ripk1Q60855 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ripk1Q60855 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ripk1Q60855 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Ripk1Q60855 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.2■■□□□ 1.3
Ripk1Q60855 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ripk1Q60855 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ripk1Q60855 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ripk1Q60855 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ripk1Q60855 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ripk1Q60855 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ripk1Q60855 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.16■■□□□ 1.3
Ripk1Q60855 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ripk1Q60855 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Ripk1Q60855 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ripk1Q60855 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.15■■□□□ 1.3
Ripk1Q60855 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Ripk1Q60855 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ripk1Q60855 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Ripk1Q60855 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ripk1Q60855 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ripk1Q60855 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ripk1Q60855 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ripk1Q60855 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ripk1Q60855 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ripk1Q60855 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.11■■□□□ 1.29
Ripk1Q60855 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ripk1Q60855 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ripk1Q60855 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ripk1Q60855 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ripk1Q60855 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ripk1Q60855 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.09■■□□□ 1.29
Ripk1Q60855 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.09■■□□□ 1.29
Ripk1Q60855 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ripk1Q60855 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
Ripk1Q60855 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ripk1Q60855 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.07■■□□□ 1.28
Ripk1Q60855 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.07■■□□□ 1.28
Ripk1Q60855 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ripk1Q60855 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ripk1Q60855 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ripk1Q60855 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ripk1Q60855 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
Ripk1Q60855 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ripk1Q60855 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ripk1Q60855 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ripk1Q60855 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ripk1Q60855 Zfp131-205ENSMUST00000223812 663 ntBASIC23.04■■□□□ 1.28
Ripk1Q60855 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ripk1Q60855 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Ripk1Q60855 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ripk1Q60855 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.01■■□□□ 1.27
Ripk1Q60855 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23■■□□□ 1.27
Ripk1Q60855 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23■■□□□ 1.27
Ripk1Q60855 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ripk1Q60855 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ripk1Q60855 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ripk1Q60855 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ripk1Q60855 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ripk1Q60855 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ripk1Q60855 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ripk1Q60855 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.94■■□□□ 1.26
Ripk1Q60855 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ripk1Q60855 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ripk1Q60855 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ripk1Q60855 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.93■■□□□ 1.26
Ripk1Q60855 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ripk1Q60855 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ripk1Q60855 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ripk1Q60855 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ripk1Q60855 Amer2-203ENSMUST00000225247 2662 ntBASIC22.91■■□□□ 1.26
Ripk1Q60855 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ripk1Q60855 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ripk1Q60855 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ripk1Q60855 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.9■■□□□ 1.26
Ripk1Q60855 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Ripk1Q60855 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ripk1Q60855 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ripk1Q60855 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ripk1Q60855 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.86■■□□□ 1.25
Ripk1Q60855 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.86■■□□□ 1.25
Ripk1Q60855 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Ripk1Q60855 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ripk1Q60855 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.85■■□□□ 1.25
Ripk1Q60855 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Ripk1Q60855 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.85■■□□□ 1.25
Ripk1Q60855 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ripk1Q60855 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.84■■□□□ 1.25
Ripk1Q60855 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ripk1Q60855 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
Ripk1Q60855 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ripk1Q60855 Gm9397-201ENSMUST00000200125 605 ntBASIC22.83■■□□□ 1.25
Ripk1Q60855 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms