Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Spg7Q3ULF4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Spg7Q3ULF4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Spg7Q3ULF4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.17■■■□□ 2.42
Spg7Q3ULF4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Spg7Q3ULF4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Spg7Q3ULF4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
Spg7Q3ULF4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Spg7Q3ULF4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.14■■■□□ 2.42
Spg7Q3ULF4 Gm8503-201ENSMUST00000118131 455 ntBASIC30.14■■■□□ 2.42
Spg7Q3ULF4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Spg7Q3ULF4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Spg7Q3ULF4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.13■■■□□ 2.41
Spg7Q3ULF4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Spg7Q3ULF4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Spg7Q3ULF4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.12■■■□□ 2.41
Spg7Q3ULF4 Gm6821-201ENSMUST00000107540 542 ntBASIC30.1■■■□□ 2.41
Spg7Q3ULF4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.1■■■□□ 2.41
Spg7Q3ULF4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Spg7Q3ULF4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
Spg7Q3ULF4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Spg7Q3ULF4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Spg7Q3ULF4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Spg7Q3ULF4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Spg7Q3ULF4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
Spg7Q3ULF4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Spg7Q3ULF4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Spg7Q3ULF4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.4
Spg7Q3ULF4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Spg7Q3ULF4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Spg7Q3ULF4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC30■■■□□ 2.39
Spg7Q3ULF4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30■■■□□ 2.39
Spg7Q3ULF4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Spg7Q3ULF4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Spg7Q3ULF4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Spg7Q3ULF4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Spg7Q3ULF4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Spg7Q3ULF4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Spg7Q3ULF4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
Spg7Q3ULF4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Spg7Q3ULF4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
Spg7Q3ULF4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC29.94■■■□□ 2.38
Spg7Q3ULF4 Gm42809-201ENSMUST00000198429 1138 ntBASIC29.94■■■□□ 2.38
Spg7Q3ULF4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Spg7Q3ULF4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Spg7Q3ULF4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Spg7Q3ULF4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Spg7Q3ULF4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC29.9■■■□□ 2.38
Spg7Q3ULF4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Spg7Q3ULF4 Nkain2-201ENSMUST00000092602 558 ntBASIC29.86■■■□□ 2.37
Spg7Q3ULF4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
Spg7Q3ULF4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Spg7Q3ULF4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Spg7Q3ULF4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
Spg7Q3ULF4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Spg7Q3ULF4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Spg7Q3ULF4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Spg7Q3ULF4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC29.82■■■□□ 2.36
Spg7Q3ULF4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Spg7Q3ULF4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Spg7Q3ULF4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC29.81■■■□□ 2.36
Spg7Q3ULF4 Gm5987-201ENSMUST00000196433 1151 ntBASIC29.81■■■□□ 2.36
Spg7Q3ULF4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC29.81■■■□□ 2.36
Spg7Q3ULF4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC29.8■■■□□ 2.36
Spg7Q3ULF4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Spg7Q3ULF4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.79■■■□□ 2.36
Spg7Q3ULF4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC29.78■■■□□ 2.36
Spg7Q3ULF4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Spg7Q3ULF4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
Spg7Q3ULF4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
Spg7Q3ULF4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC29.77■■■□□ 2.36
Spg7Q3ULF4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Spg7Q3ULF4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Spg7Q3ULF4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Spg7Q3ULF4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC29.75■■■□□ 2.35
Spg7Q3ULF4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Spg7Q3ULF4 Gm6345-201ENSMUST00000180378 1691 ntBASIC29.74■■■□□ 2.35
Spg7Q3ULF4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Spg7Q3ULF4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Spg7Q3ULF4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.35
Spg7Q3ULF4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Spg7Q3ULF4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC29.7■■■□□ 2.35
Spg7Q3ULF4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC29.69■■■□□ 2.34
Spg7Q3ULF4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Spg7Q3ULF4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Spg7Q3ULF4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
Spg7Q3ULF4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Spg7Q3ULF4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
Spg7Q3ULF4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC29.64■■■□□ 2.34
Spg7Q3ULF4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Spg7Q3ULF4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC29.62■■■□□ 2.33
Spg7Q3ULF4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Spg7Q3ULF4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Spg7Q3ULF4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Spg7Q3ULF4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Spg7Q3ULF4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Spg7Q3ULF4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Spg7Q3ULF4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Spg7Q3ULF4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
Spg7Q3ULF4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC29.56■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms